Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Review
. 2025 Mar;48(3):227-241.
doi: 10.1016/j.tins.2024.12.010. Epub 2025 Jan 21.

Elucidating hemodynamics and neuro-glio-vascular signaling using rodent fMRI

Affiliations
Review

Elucidating hemodynamics and neuro-glio-vascular signaling using rodent fMRI

Xiaoqing Alice Zhou et al. Trends Neurosci. 2025 Mar.

Abstract

Despite extensive functional mapping studies using rodent functional magnetic resonance imaging (fMRI), interpreting the fMRI signals in relation to their neuronal origins remains challenging due to the hemodynamic nature of the response. Ultra high-resolution rodent fMRI, beyond merely enhancing spatial specificity, has revealed vessel-specific hemodynamic responses, highlighting the distinct contributions of intracortical arterioles and venules to fMRI signals. This 'single-vessel' fMRI approach shifts the paradigm of rodent fMRI, enabling its integration with other neuroimaging modalities to investigate neuro-glio-vascular (NGV) signaling underlying a variety of brain dynamics. Here, we review the emerging trend of combining multimodal fMRI with opto/chemogenetic neuromodulation and genetically encoded biosensors for cellular and circuit-specific recording, offering unprecedented opportunities for cross-scale brain dynamic mapping in rodent models.

Keywords: functional MRI; neuroimaging; neuromodulation; neurovascular coupling; optogenetics; vasodynamics.

PubMed Disclaimer

Conflict of interest statement

Declaration of interests X.Y. is the co-founder of MRIBOT LLC. The other authors declare no competing interests in relation to this work.

Figures

Figure 1:
Figure 1:. Vascular Networks Define Functional Area Borders in the Rodent Brain.
This figure showcases high-resolution fMRI images of rodent brains, emphasizing the intricate vascular networks that delineate boundaries between distinct functional areas. The lower panel illustrates various MRI measurement strategies used to detect individual vessels, with brighter voxels indicating venules and darker voxels representing arterioles [77]. Abbreviation: BOLD – blood-oxygen-level-dependent; CBV – cerebral blood volume; CBF/v – cerebral blood flow/velocity. Figure created in part with BioRender.com. Imaging panels from [77]
Figure 2.
Figure 2.. Integration of Advanced Neuroteechniques and fMRI for NGV Network Investigation.
The figure presents an integrative approach utilizing advanced neuro-techniques and fMRI to investigate the intricate NGV networks in the brain. The schematic diagram illustrates the combined application of cutting-edge methodologies such as optogenetics, chemogenetics, and fiber photometry-based genetically encoded biosensor recordings alongside high-resolution fMRI. These techniques collectively enable visualization and comprehensive analysis of neuroglial interactions, vascular dynamics, and their integrated role in brain function and pathology. This multidimensional approach could provide valuable insights into the complex interplay of neurons, glial cells (e.g. astrocytes), smooth muscle cells (SMC) and blood vessels, advancing our understanding of neurovascular coupling and its implications for neurological disorders (modified from the graphic abstract of [60])

References

    1. Logothetis NK (2008) What we can do and what we cannot do with fMRI. Nature 453, 869–878. 10.1038/nature06976 - DOI - PubMed
    1. Nunes D et al. (2019) Layer-specific connectivity revealed by diffusion-weighted functional MRI in the rat thalamocortical pathway. NeuroImage 184, 646–657. 10.1016/j.neuroimage.2018.09.050 - DOI - PMC - PubMed
    1. Le Bihan D et al. (2001) Diffusion tensor imaging: Concepts and applications. Journal of Magnetic Resonance Imaging 13, 534–546. 10.1002/jmri.1076 - DOI - PubMed
    1. Ghosh S et al. (2018) Probing the brain with molecular fMRI. Curr Opin Neurobiol 50, 201–210. 10.1016/j.conb.2018.03.009 - DOI - PMC - PubMed
    1. Just N and Faber C (2019) Probing activation-induced neurochemical changes using optogenetics combined with functional magnetic resonance spectroscopy: a feasibility study in the rat primary somatosensory cortex. Journal of neurochemistry 150. 10.1111/jnc.14799 - DOI - PubMed

Publication types