Therapeutic exploration potential of adenosine receptor antagonists through pharmacophore ligand-based modelling and pharmacokinetics studies against Parkinson disease
- PMID: 39872470
- PMCID: PMC11762050
- DOI: 10.1007/s40203-025-00305-9
Therapeutic exploration potential of adenosine receptor antagonists through pharmacophore ligand-based modelling and pharmacokinetics studies against Parkinson disease
Abstract
Parkinson's Disease (PD) is a neurodegenerative disorder that primarily affects persons aged 65 and older. It leads to a decline in motor function as a result of the buildup of abnormal protein deposits called Lewy bodies in the brain. Existing therapies exhibit restricted effectiveness and undesirable side effects. The objective was to discover potent medications that have demonstrated effectiveness in treating PD by employing computational methods. This work employed a comprehensive approach to evaluate 70 pyrimidine derivatives for their potential in treating PD. The evaluation involved the use of QSAR modelling, virtual screening, molecular docking, MD simulation, ADMET analysis, and antagonist inhibitor creation. Six compounds passed all the evaluation, while for MD simulation, carried out between the compound with best docking score and the reference drug, compound 57 was discovered to possess more stability compared to theophylline which is the reference drug, and it functions as a primary inhibitor of the adenosine A2A receptor. Additionally, the study determined that compound 57 satisfied the Rule of Five (Ro5) standards and exhibited robust physicochemical characteristics. The compound exhibited moderate to low levels of hERG inhibition. The conducted investigations highlighted promising outcomes of natural compounds that can orient towards the rational development of effective Parkinson's disease inhibitors.
Supplementary information: The online version contains supplementary material available at 10.1007/s40203-025-00305-9.
Keywords: ADMET; Molecular docking; Molecular dynamics and pharmacophore modeling; Parkinson disease; QSAR.
© The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature 2025. Springer Nature or its licensor (e.g. a society or other partner) holds exclusive rights to this article under a publishing agreement with the author(s) or other rightsholder(s); author self-archiving of the accepted manuscript version of this article is solely governed by the terms of such publishing agreement and applicable law.
Conflict of interest statement
Conflict of interestThe authors declare no competing interests.
References
-
- Abbas N, Swamy PMG, Dhiwar P, Patel S, Giles D (2021) Development of fused and substituted pyrimidine derivatives as potent anticancer agents (a review). Pharm Chem J 54(12):1215–1226. 10.1007/s11094-021-02346-8
-
- Abdellatif KRA, Bakr RB (2021) Pyrimidine and fused pyrimidine derivatives as promising protein kinase inhibitors for cancer treatment. Med Chem Res 30(1):31–49. 10.1007/s00044-020-02656-8
-
- Abdelshaheed MM, Fawzy IM, El-Subbagh HI, Youssef KM (2021) Piperidine nucleus in the field of drug discovery. Future J Pharm Sci. 10.1186/s43094-021-00335-y
-
- Abdulfatai U, Ejeh S, Ajala A, Adawara SN, Babatunde OS, Ibrahim ZY (2024) QSAR, molecular docking, and molecular designs of some anti-epilepsy compounds. Intell Pharm 2(3):427–434. 10.1016/j.ipha.2023.11.011
-
- Abechi SE, Ejeh S, Abduljelil A (2023a) In silico screening of potential Tumor necrosis factor alpha (TNF-α) inhibitors through molecular modeling, molecular docking, and pharmacokinetics evaluations. Sci Afr 21:e01830. 10.1016/j.sciaf.2023.e01830
LinkOut - more resources
Full Text Sources