Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Review
. 2025 Jun;20(6):1468-1484.
doi: 10.1038/s41596-024-01099-4. Epub 2025 Feb 10.

Visually guided in vivo single-cell electroporation for monitoring and manipulating mammalian hippocampal neurons

Affiliations
Review

Visually guided in vivo single-cell electroporation for monitoring and manipulating mammalian hippocampal neurons

Kevin C Gonzalez et al. Nat Protoc. 2025 Jun.

Abstract

Sparse, single-cell labeling approaches enable high-resolution, high signal-to-noise recordings from subcellular compartments and intracellular organelles and allow precise manipulations of individual cells and local circuits while minimizing complex changes associated with global network manipulations. However, thus far, only a limited number of approaches have been developed to label single cells with unique combinations of genetically encoded indicators, target deep cortical structures or sustainably use the same chronic preparation for weeks. Here we developed a method to deliver plasmids selectively to single pyramidal neurons in the mouse dorsal hippocampus using two-photon visually guided in vivo single-cell electroporation to address these limitations. This method allows long-term plasmid expression in a controlled number of individual pyramidal neurons, facilitating subcellular resolution imaging, intracellular organelle tracking, monosynaptic input mapping, plasticity induction and targeted whole-cell patch-clamp recordings.

PubMed Disclaimer

Conflict of interest statement

Competing interests: The authors declare no competing interests.

References

    1. Haas K, Sin WC, Javaherian A, Li Z & Cline HT Single-cell electroporation for gene transfer in vivo. Neuron 29, 583–591 (2001). - PubMed
    1. Margrie TW et al. Targeted whole-cell recordings in the mammalian brain in vivo. Neuron 39, 911–918 (2003). - PubMed
    1. Kitamura K, Judkewitz B, Kano M, Denk W & Häusser M Targeted patch-clamp recordings and single-cell electroporation of unlabeled neurons in vivo. Nat. Methods 5, 61–67 (2008). - PubMed
    1. Judkewitz B, Rizzi M, Kitamura K & Häusser M Targeted single-cell electroporation of mammalian neurons in vivo. Nat. Protoc. 4, 862–869 (2009). - PubMed
    1. Wertz A et al. Presynaptic networks. Single-cell-initiated monosynaptic tracing reveals layer-specific cortical network modules. Science 349, 70–74 (2015). - PubMed

Key references

    1. Rolotti SV et al. Neuron 110, 783–794.e6 (2022): 10.1016/j.neuron.2021.12.003 - DOI - PMC - PubMed
    1. O’Hare JK et al. Science 375, eabm1670 2022: 10.1126/science.abm1670 - DOI - PMC - PubMed
    1. Geiller T et al. Nature 601, 105–109 (2022): 10.1038/s41586-021-04169-9 - DOI - PMC - PubMed
    1. Liao Z et al. Nat. Commun. 15, 6295 (2024): 10.1038/s41467-024-50546-z - DOI - PMC - PubMed

Publication types

Grants and funding

LinkOut - more resources