Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2025 Feb 28.
doi: 10.1007/s10278-025-01401-0. Online ahead of print.

Multi-attention Mechanism for Enhanced Pseudo-3D Prostate Zonal Segmentation

Affiliations

Multi-attention Mechanism for Enhanced Pseudo-3D Prostate Zonal Segmentation

Chetana Krishnan et al. J Imaging Inform Med. .

Abstract

This study presents a novel pseudo-3D Global-Local Channel Spatial Attention (GLCSA) mechanism designed to enhance prostate zonal segmentation in high-resolution T2-weighted MRI images. GLCSA captures complex, multi-dimensional features while maintaining computational efficiency by integrating global and local attention in channel and spatial domains, complemented by a slice interaction module simulating 3D processing. Applied across various U-Net architectures, GLCSA was evaluated on two datasets: a proprietary set of 44 patients and the public ProstateX dataset of 204 patients. Performance, measured using the Dice Similarity Coefficient (DSC) and Mean Surface Distance (MSD) metrics, demonstrated significant improvements in segmentation accuracy for both the transition zone (TZ) and peripheral zone (PZ), with minimal parameter increase (1.27%). GLCSA achieved DSC increases of 0.74% and 11.75% for TZ and PZ, respectively, in the proprietary dataset. In the ProstateX dataset, improvements were even more pronounced, with DSC increases of 7.34% for TZ and 24.80% for PZ. Comparative analysis showed GLCSA-UNet performing competitively against other 2D, 2.5D, and 3D models, with DSC values of 0.85 (TZ) and 0.65 (PZ) on the proprietary dataset and 0.80 (TZ) and 0.76 (PZ) on the ProstateX dataset. Similarly, MSD values were 1.14 (TZ) and 1.21 (PZ) on the proprietary dataset and 1.48 (TZ) and 0.98 (PZ) on the ProstateX dataset. Ablation studies highlighted the effectiveness of combining channel and spatial attention and the advantages of global embedding over patch-based methods. In conclusion, GLCSA offers a robust balance between the detailed feature capture of 3D models and the efficiency of 2D models, presenting a promising tool for improving prostate MRI image segmentation.

Keywords: Attention variant; Deep learning; Dot product; Feature map; Prostate MRI image segmentation.

PubMed Disclaimer

Conflict of interest statement

Declarations. Ethics Approval: The Institutional Review Board (IRB) at the University of Alabama at Birmingham approved this study. Consent to Participate: All subjects consented to use their images for data analysis. Consent for Publication: The authors affirm that human research participants provided informed consent for data publication. Competing Interests: The authors declare no competing interests.

References

    1. Derekas P, Spyridonos P, Likas A, Zampeta A, Gaitanis G, Bassukas I: The Promise of Semantic Segmentation in Detecting Actinic Keratosis Using Clinical Photography in the Wild. Cancers (Basel) 15(19):4861, 2023. https://doi.org/10.3390/cancers15194861 - DOI - PubMed
    1. Choi SR, Lee M: Transformer Architecture and Attention Mechanisms in Genome Data Analysis: A Comprehensive Review. Biology (Basel) 12, 2023
    1. Shamshad F, et al.: Transformers in medical imaging: A survey. Med Image Anal 88:102802, 2023 - DOI - PubMed
    1. Dolz J, Gopinath K, Yuan J, Lombaert H, Desrosiers C, Ben Ayed I: HyperDense-Net: A Hyper-Densely Connected CNN for Multi-Modal Image Segmentation. IEEE Trans Med Imaging 38:1116-1126, 2019 - DOI - PubMed
    1. Xu Y, et al.: 3D-SIFT-Flow for atlas-based CT liver image segmentation. Med Phys 43:2229, 2016 - DOI - PubMed