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Review
. 2024 Nov 25:2:e19.
doi: 10.1017/ext.2024.18. eCollection 2024.

Inferring species extinction from sighting data

Affiliations
Review

Inferring species extinction from sighting data

Rachel S McCrea et al. Camb Prism Extinct. .

Abstract

Understanding whether a species still persists, or the timing of its extinction is challenging, however, such knowledge is fundamental for effective species management.For the vast majority of species our understanding of their existence is based solely on sighting data that can range from museum specimens and clear photographs, through vocalisations, to markings and oral accounts.Here we review the methods that have been developed to infer the extinction of species from a sighting record, providing an understanding of their assumptions and applications. We have also produced an RShiny package which can be used to implement some of the methods presented in the article.While there are a number of potential areas that could be further developed, the methods reviewed provide a useful tool for inferring species extinction.

Keywords: Poisson process; extaille; extinction; extirpation; rediscovery; time series.

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Conflict of interest statement

DLR is a senior editor of the journal Cambridge Prisms: Extinction.

References

    1. Alroy J (2014) A simple Bayesian method of inferring extinction. Paleobiology 40, 584–607.
    1. Boakes EH, Rout TM and Collen B (2015) Inferring species extinction: the use of sighting records. Methods in Ecology and Evolution 6 (6), 678–687.
    1. Brook BW, Buettel JC and Jarić I (2019) A fast-re-sampling method for using reliability ratings of sightings with extinction-date estimators. Ecology 100 (9), e02787. - PubMed
    1. Brook BW, Sleightholme SR, Campbell CR, Jarić I and Buettel JC (2023) Resolving when (and where) the thylacine went extinct. Science of the Total Environment 877, 162878. - PubMed
    1. Burgman M, Maslin BR, Andrewartha D, Keatley MR, Boek C and McCarthy M (2000) Inferring Threat from Scientific Collections: Power Tests and an Application to Western Australian Acacia Species. New York: Springer.

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