Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2025 Apr 10;14(4):e0124124.
doi: 10.1128/mra.01241-24. Epub 2025 Mar 25.

Complete genome sequence of Escherichia marmotae F12YCO47 isolated from a healthy human fecal sample

Collaborators, Affiliations

Complete genome sequence of Escherichia marmotae F12YCO47 isolated from a healthy human fecal sample

Daniel Ho et al. Microbiol Resour Announc. .

Abstract

Escherichia marmotae has been found in animals and the environment. Here, we isolated it from a healthy human fecal sample. The 4.91 Mb circular genome (GC content = 50.34%) is associated with three plasmids: pF12YCO47-2 (89.9 kb, 50.2% GC), pF12YCO47-3 (47.9 kb, 44.3% GC), and pF12YCO47-1 (95.4 kb, 47.2% GC).

Keywords: Escherichia marmotae; fecal microbiota; genome sequencing; human gut microbiome.

PubMed Disclaimer

Conflict of interest statement

The authors declare no conflict of interest.

References

    1. Liu S, Jin D, Lan R, Wang Y, Meng Q, Dai H, Lu S, Hu S, Xu J. 2015. Escherichia marmotae sp. nov., isolated from faeces of Marmota himalayana. Int J Syst Evol Microbiol 65:2130–2134. doi:10.1099/ijs.0.000228 - DOI - PubMed
    1. Sivertsen A, Dyrhovden R, Tellevik MG, Bruvold TS, Nybakken E, Skutlaberg DH, Skarstein I, Kommedal Ø. 2022. Escherichia marmotae-a human pathogen easily misidentified as Escherichia coli. Microbiol Spectr 10:e0203521. doi:10.1128/spectrum.02035-21 - DOI - PMC - PubMed
    1. Biggs PJ, Moinet M, Rogers LE, Devane M, Muirhead R, Stott R, Marshall JC, Cookson AL. 2024. Draft genome sequences of Escherichia spp. isolates from New Zealand environmental sources. Microbiol Resour Announc 13:e0100723. doi:10.1128/mra.01007-23 - DOI - PMC - PubMed
    1. Zhurilov PA, Andriyanov PA, Tutrina AI, Razheva IV, Liskova EA, Gladkova NA, Kashina DD, Yashin IV, Blokhin AA. 2023. Characterization and comparative analysis of the Escherichia marmotae M-12 isolate from bank vole (Myodes glareolus). Sci Rep 13:13949. doi:10.1038/s41598-023-41223-0 - DOI - PMC - PubMed
    1. Leong KSW, Jayasinghe TN, Derraik JGB, Albert BB, Chiavaroli V, Svirskis DM, Beck KL, Conlon CA, Jiang Y, Schierding W, Vatanen T, Holland DJ, O’Sullivan JM, Cutfield WS. 2019. Protocol for the gut bugs trial: a randomised double-blind placebo-controlled trial of gut microbiome transfer for the treatment of obesity in adolescents. BMJ Open 9:e026174. doi:10.1136/bmjopen-2018-026174 - DOI - PMC - PubMed

LinkOut - more resources