Deep mutational scanning of rabies glycoprotein defines mutational constraint and antibody-escape mutations
- PMID: 40398416
- PMCID: PMC12162216
- DOI: 10.1016/j.chom.2025.04.018
Deep mutational scanning of rabies glycoprotein defines mutational constraint and antibody-escape mutations
Abstract
Rabies virus causes nearly 60,000 human deaths annually. Antibodies that target the rabies glycoprotein (G) are being developed as post-exposure prophylactics, but mutations in G can render such antibodies ineffective. Here, we use pseudovirus deep mutational scanning to measure how all single-amino-acid mutations to G affect cell entry and neutralization by a panel of antibodies. These measurements identify sites critical for G function and define constrained regions that are attractive epitopes for clinical antibodies, including at the apex and base of the protein. We provide complete maps of escape mutations for eight monoclonal antibodies, including some in clinical use or development. Escape mutations for most antibodies are present in some natural rabies strains. Overall, this work provides comprehensive information on the functional and antigenic effects of G mutations that can inform development of stabilized vaccine antigens and antibodies that are resilient to rabies genetic variation.
Keywords: Rabishield; antibody escape; antigenic variation; deep mutational scanning; glycoprotein; pseudovirus; rabies; type III fusion protein.
Copyright © 2025 The Author(s). Published by Elsevier Inc. All rights reserved.
Conflict of interest statement
Declaration of interests J.D.B. consults on topics related to viral evolution for Apriori Bio, Invivyd, the Vaccine Company, and Pfizer. J.D.B., A.K.A., and C.E.R. are inventors on Fred Hutch licensed patents related to viral deep mutational scanning. N.P.K. consults on topics related to vaccine design for AstraZeneca, and the King lab has received unrelated sponsored research agreements from Pfizer and GlaxoSmithKline.
Update of
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Deep mutational scanning of rabies glycoprotein defines mutational constraint and antibody-escape mutations.bioRxiv [Preprint]. 2024 Dec 17:2024.12.17.628970. doi: 10.1101/2024.12.17.628970. bioRxiv. 2024. Update in: Cell Host Microbe. 2025 Jun 11;33(6):988-1003.e10. doi: 10.1016/j.chom.2025.04.018. PMID: 39763725 Free PMC article. Updated. Preprint.
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