Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2025 Jun 24.
doi: 10.1038/s41589-025-01936-x. Online ahead of print.

A small-molecule VHL molecular glue degrader for cysteine dioxygenase 1

Affiliations

A small-molecule VHL molecular glue degrader for cysteine dioxygenase 1

Antonin Tutter et al. Nat Chem Biol. .

Abstract

The von Hippel-Lindau tumor suppressor gene product (pVHL) is an E3 ligase substrate receptor that binds proline-hydroxylated hypoxia-inducible factor HIF1α, leading to its ubiquitin-dependent degradation. By using protein arrays, we identified a small molecule that binds the HIF1α-binding pocket on pVHL and functions as a molecular glue degrader of the neosubstrate cysteine dioxygenase (CDO1) by recruiting it into the VHL-Cullin-RING E3 ligase complex and leading to its selective degradation. The CDO1-binding region involved in VHL recruitment was characterized through a combination of mutagenesis and protein-protein docking coupled with molecular-dynamics-based solvation analysis. The X-ray structure of the ternary complexes of VHL, CDO1 and degrader molecules confirms the binding region prediction and provides atomic insights into key molecular glue interactions.

PubMed Disclaimer

Conflict of interest statement

Competing interests: All authors are or were employees of Novartis Biomedical Research and may have held stock in Novartis when the research for the manuscript was performed.

References

    1. Maxwell, P. H. et al. The tumour suppressor protein VHL targets hypoxia-inducible factors for oxygen-dependent proteolysis. Nature 399, 271–275 (1999). - PubMed - DOI
    1. Buckley, D. L. et al. Targeting the von Hippel–Lindau E3 ubiquitin ligase using small molecules to disrupt the VHL/HIF-1α interaction. J. Am. Chem. Soc. 134, 4465–4468 (2012). - PubMed - PMC - DOI
    1. Van Molle, I. et al. Dissecting fragment-based lead discovery at the von Hippel–Lindau protein:hypoxia inducible factor 1α protein–protein interface. Chem. Biol. 19, 1300–1312 (2012). - PubMed - PMC - DOI
    1. Buckley, D. L. et al. Small-molecule inhibitors of the interaction between the E3 ligase VHL and HIF1α. Angew. Chem. Int. Ed. Engl. 51, 11463–11467 (2012). - PubMed - PMC - DOI
    1. Sakamoto, K. M. et al. Protacs: chimeric molecules that target proteins to the Skp1–Cullin–F box complex for ubiquitination and degradation. Proc. Natl Acad. Sci. USA 98, 8554–8559 (2001). - PubMed - PMC - DOI