Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Review
. 2025 Jul;24(4):e70224.
doi: 10.1111/1541-4337.70224.

Strong-Flavor Baijiu Pit Mud Microbiome in the Context of Modern Industry: From a Black Box Under Empiricism to the Gradual Revelation of Microbial Ecosystems

Affiliations
Review

Strong-Flavor Baijiu Pit Mud Microbiome in the Context of Modern Industry: From a Black Box Under Empiricism to the Gradual Revelation of Microbial Ecosystems

Jun-Lan Mei et al. Compr Rev Food Sci Food Saf. 2025 Jul.

Abstract

Chinese strong-flavor Baijiu (CSFB), one of the most popular categories in the alcoholic beverage market, is supposed to comply with the current industry development trend and achieve mechanization, modernization, and unification of production. Solid-state fermentation in the mud cellar is the fundamental characteristic of CSFB. Pit mud, which provides the necessary conditions for producing the precursors of crucial flavor substances, plays a decisive role in CSFB's characteristics and quality. How to intervene and regulate the microbiome of pit mud, either using top-down or bottom-up approaches, to ultimately obtain an ecosystem that consistently provides the characteristic flavor substances in unified, standard, and mechanized production has become an urgent problem to be solved. This review summarizes the current knowledge of the pit mud microbiome in Baijiu fermentation, focusing on evolution and assembly patterns, functional roles, and ecological succession over batch-to-batch fermentation for decades or even centuries. Key challenges are identified, including controlling microbial interactions and enabling standardized, large-scale production of microbiome adaptations. This review also explores the application of advanced techniques such as omics tools and synthetic community design to improve microbiome regulation. We hold the view that the understanding of pit mud microbial ecosystems combined with technological advances provides an opportunity for intelligent microbiome management. By utilizing these tools, the production of CSFB can move in the direction of more consistent flavor and better quality control, with the potential for significant improvements in microbial engineering and industrial practices.

Keywords: Baijiu; assembly mechanism; community structure; microbiota; microecosystem; pit mud.

PubMed Disclaimer

References

    1. Ahn, J. H., E. S. Lim, S. M. Kim, S. O. Han, and Y. Um 2023. “Recent Advances in Microbial Production of Medium Chain Fatty Acid From Renewable Carbon Resources: A Comprehensive Review.” Bioresource Technology 381: 129147. https://doi.org/10.1016/j.biortech.2023.129147.
    1. Arnold, B. J., I.‐T. Huang, and W. P. Hanage 2022. “Horizontal Gene Transfer and Adaptive Evolution in Bacteria.” Nature Reviews Microbiology 20, no. 4: 206–218. https://doi.org/10.1038/s41579‐021‐00650‐4.
    1. Baas‐Becking, L. G. M. 1934. Geobiologie of Inleiding Tot De Milieukunde. WP Van Stockum & Zoon NV.
    1. Baena, S., M. L. Fardeau, M. Labat, B. Ollivier, J. L. Garcia, and B. K. C. Patel 2000. “Aminobacterium mobile sp. nov., a New Anaerobic Amino‐Acid‐Degrading Bacterium.” International Journal of Systematic and Evolutionary Microbiology 50: 259–264. https://doi.org/10.1099/00207713‐50‐1‐259.
    1. Bai, X., Y. Qu, D. Lin, H. Wu, and J. Tang 2024. “Isolation and Identification of Acid Urease Producing Strains From Pits and Their Effects on pH and Flavor Substances Production of Pit Mud Model.” Food and Fermentation Industries 50, no. 12: 275–283. https://doi.org/10.13995/j.cnki.11‐1802/ts.036750.

Substances