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[Preprint]. 2025 Jul 11:2025.07.10.25330831.
doi: 10.1101/2025.07.10.25330831.

Rare but Relevant: Assessing Variants in Dystonia-linked Genes in Parkinson's Disease

Affiliations

Rare but Relevant: Assessing Variants in Dystonia-linked Genes in Parkinson's Disease

Lara M Lange et al. medRxiv. .

Abstract

Background: Dystonia and Parkinson's disease (PD) show clinical and genetic overlap, but the relevance of dystonia gene variants in PD remains unclear.

Objective: To assess the frequency of dystonia-linked pathogenic variants in PD.

Methods: We screened sequencing data from 15,738 individuals (7,851 PD, 4,287 atypical parkinsonism, and 3,600 unaffected) from GP2 and AMP-PD for variants in genes linked to isolated dystonia, dystonia-parkinsonism, and myoclonus-dystonia.

Results: Pathogenic variants were only identified in PD patients. Forty-five PD individuals (0.57%) carried 26 distinct (likely) pathogenic variants in nine dystonia-linked genes, most frequently in GCH1, followed by VPS16.

Conclusion: Though rare, pathogenic variants in dystonia-linked genes are present in clinically and pathologically diagnosed PD. Our results reinforce GCH1 as a PD-relevant gene with clinical implications, while variants identified in other genes are rare and of sometimes uncertain relation to the PD phenotype.

Keywords: Dystonia; GCH1; Monogenic; Parkinson’s disease; VPS16.

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Conflict of interest statement

LML received support for a dystonia research fellowship from the Bachmann Strauss Dystonia Foundation and a fellowship stipend from the German Research Foundation (DFG, project number 553295018). ZHF has a contract with the Michael J Fox Foundation for work on the Global Parkinson’s Genetics Program. She received support from the Aligning Science Across Parkinson’s Initiative (Global Parkinson’s Genetics Program). IJKS reports support from the Michael J Fox Foundation (MJFF-023355). CHL received funding from the National Science and Technology Council (NSTC) and the National Health Research Institutes (NHRI). RMW received grants from the National Science and Technology Council and the National Taiwan University Hospital. AS received grants from the Michael J Fox Foundation and has a contract for the Global Parkinson’s Genetics Program. NEM received honoraria from the Parkinson’s foundation to be part of the PDGENEration steering committee. HRM received grants from Parkinson’s UK, Cure Parkinson’s Trust, the Medical Research Council, and the Michael J Fox Foundation. SYL reports consultancies from the Michael J. Fox Foundation for Parkinson’s research (MJFF), and the Aligning Science Across Parkinson’s-Global Parkinson’s Genetics Program (ASAP-GP2). CK received grant support from the German Research Foundation (DFG), the Aligning Science Across Parkinson’s-Global Parkinson’s Genetics Program (ASAP-GP2) and from the Michael J Fox Foundation (MJFF). She also serves as a medical advisor to Centogene and Biogen. All other authors report no financial disclosures and conflicts of interest related to this manuscript.

Figures

Figure 1.
Figure 1.. Study design and workflow.
We screened short-read whole-genome sequencing (WGS) data from the Global Parkinson’s Genetics Program (GP2; Release 8 [R8]) and the Accelerating Medicines Partnership - Parkinson’s disease (AMP-PD, Release 4 [R4]) for known variants in genes linked to different forms of dystonia. We included genes linked to isolated as well as combined dystonia phenotypes, the latter including dystonia-parkinsonism and myoclonus-dystonia. Only rare variants predicted to be pathogenic or likely pathogenic were included in further analyses. For identified carriers, we evaluated genotype-phenotype correlations, investigated segregation, and assessed ancestry distributions, where possible. This figure was created with BioRender.

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