Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2025 Jul 27;25(1):161.
doi: 10.1007/s10142-025-01667-1.

Analysis of the AP2/ERF transcription factor family in Eriobotrya japonica and its role in exogenous melatonin-mediated regulation of salt stress

Affiliations

Analysis of the AP2/ERF transcription factor family in Eriobotrya japonica and its role in exogenous melatonin-mediated regulation of salt stress

Ling Zhu et al. Funct Integr Genomics. .

Abstract

AP2/ERF transcription factors (TFs) are involved in various regulatory pathways related to plant growth, development, and stress responses. The growth of Eriobotrya japonica, a popular fruit and medicinal plant, is affected by salt stress. Currently, the functions of E. japonica AP2/ERF in response to salt stress and its role in alleviating salt stress caused by exogenous melatonin (MT) remain unclear. Therefore, in this study, a bioinformatics approach was used to analyze the AP2/ERF TF family of E. japonica and its expression patterns under exogenous MT-regulated salt stress. A total of 187 AP2/ERF TFs on 18 chromosomes were identified in E. japonica, and phylogenetic analyses classified them into four subfamilies: AP2, ERF, DREB, and RAV. Each subfamily contains a relatively large number of biotic or abiotic stresses and hormone related cis-acting elements. There are 61 DEGs of EjAP2/ERF involved in the regulation of NaCl stress by exogenous melatonin. Among these genes,, seven DEGs were involved in the response to ethylene and defense signals under salt stress. These genes are involved in the regulation of NaCl-stressed E. japonica by exogenous MT by activating or repressing the transcription of downstream target genes. Notably, EjERF11, EjERF73, and EjERF86 may have functions similar to those of their homologous genes and may serve as vital genes for salt tolerance. This study is the first to investigate the functions of EjAP2/ERF genes in exogenous MT-regulated salt stress, and provides a theoretical foundation for exploring more features of AP2/ERF genes and a basis for breeding E. japonica with salt stress resistance.

Keywords: Eriobotrya japonica; AP2/ERF transcription factors; Ethylene signal response; Exogenous melatonin; Salt stress.

PubMed Disclaimer

Conflict of interest statement

Declarations. Ethics approval and consent to participate: This study does not include human or animal subjects. Consent for publication: Not applicable. Clinical trial number: Not applicable. Statement on guidelines: All experimental studies and experimental materials involved in this research are in full compliance with relevant institutional, national and international guidelines and legislation. Competing interests: The authors declare no competing interests.

Similar articles

References

    1. Ahammed GJ, Li Y, Li X, Han WY, Chen S (2018) Epigallocatechin-3-gallate alleviates salinity-retarded seed germination and oxidative stress in tomato. J Plant Growth Regul 37:1349–1356
    1. Benjamini Y, Yekutieli D (2001) The control of the false discovery rate in multiple testing under dependency. Annals of Statistics, pp 1165–1188. https://www.jstor.org/stable/2674075
    1. Cantalapiedra CP, Hernández-Plaza A, Letunic I, Bork P, Huerta-Cepas J (2021) eggNOG-mapper v2: functional annotation, orthology assignments, and domain prediction at the metagenomic scale. Mol Biol Evol 38(12):5825–5829. https://doi.org/10.1093/molbev/msab293 - DOI
    1. Charfeddine M, Charfeddine S, Ghazala I, Bouaziz D, Bouzid RG (2019) Investigation of the response to salinity of transgenic potato plants overexpressing the transcription factor StERF94. J Biosci 44(6):141
    1. Chen S, Zhou Y, Chen Y, Gu J (2018a) fastp: an ultra-fast all-in-one FASTQ preprocessor. Bioinformatics 34(17):i884–i890. https://doi.org/10.1093/bioinformatics/bty560 - DOI

MeSH terms

LinkOut - more resources