Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
Review
. 2025 Jul 25:6:e23.
doi: 10.1017/qpb.2025.10018. eCollection 2025.

The pipelines of deep learning-based plant image processing

Affiliations
Review

The pipelines of deep learning-based plant image processing

Kaiyue Hong et al. Quant Plant Biol. .

Abstract

Recent advancements in data science and artificial intelligence have significantly transformed plant sciences, particularly through the integration of image recognition and deep learning technologies. These innovations have profoundly impacted various aspects of plant research, including species identification, disease detection, cellular signaling analysis, and growth monitoring. This review summarizes the latest computational tools and methodologies used in these areas. We emphasize the importance of data acquisition and preprocessing, discussing techniques such as high-resolution imaging and unmanned aerial vehicle (UAV) photography, along with image enhancement methods like cropping and scaling. Additionally, we review feature extraction techniques like colour histograms and texture analysis, which are essential for plant identification and health assessment. Finally, we discuss emerging trends, challenges, and future directions, offering insights into the applications of these technologies in advancing plant science research and practical implementations.

Keywords: data science; deep learning; feature extraction; image recognition; machine learning.

PubMed Disclaimer

Conflict of interest statement

None.

Figures

None
Graphical abstract
Figure 1.
Figure 1.
CNN and data training process flowchart. A. DL-based image processing flowchart; B. Data training process elowchart.
Figure 2.
Figure 2.
A keyword network analysis of DL in plants. A keyword analysis of plant AI technologies reveals clear technological connections. Blue lines indicate image processing technologies, and green lines represent plant phenotyping and growth analysis. At its core, ‘DL’ links to ‘ML’, ‘image processing,’ and ‘computer vision.’ Technologies such as ‘remote sensing’ and ‘precision agriculture’. The relationships between terms like ‘plant growth’, ‘diseases’, ‘phenomics’, and ‘smart agriculture’ indicate the growing integration of AI and ML in improving plant practices.

Similar articles

References

    1. Abebe, A. M. , Kim, Y. , Kim, J. , Kim, S. L. , & Baek, J. (2023). Image-based high-throughput phenotyping in horticultural crops. Plants, 12(10), 2061. 10.3390/plants12102061 - DOI - PMC - PubMed
    1. Adke, S. , Li, C. , Rasheed, K. M. , & Maier, F. W. (2022). Supervised and weakly supervised deep learning for segmentation and counting of cotton bolls using proximal imagery. Sensors, 22(10), 3688. 10.3390/s22103688 - DOI - PMC - PubMed
    1. Agathokleous, E. , Rillig, M. C. , Peñuelas, J. , & Yu, Z. (2024). One hundred important questions facing plant science derived using a large language model. Trends in Plant Science, 29(2), 210–218. 10.1016/j.tplants.2023.06.008 - DOI - PubMed
    1. Ahmad, I. , Hamid, M. , Yousaf, S. , Shah, S. T. , & Ahmad, M. O. (2020). Optimizing pretrained convolutional neural networks for tomato leaf disease detection. Complexity, 2020(1), 8812019. 10.1109/ACCESS.2021.3119655 - DOI
    1. Ahmad, M. , Abdullah, M. , Moon, H. , & Han, D. (2021). Plant disease detection in imbalanced datasets using efficient convolutional neural networks with stepwise transfer learning. IEEE Access, 9, 140565–140580. 10.1109/ACCESS.2021.3119655 - DOI

LinkOut - more resources