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Case Reports
. 2025 Nov;12(11):2367-2371.
doi: 10.1002/acn3.70179. Epub 2025 Aug 26.

Single-Cell RNA Seq in Sydenham Chorea Shows B Cell HLA-DR/DQ Upregulation and Plasma Cell Proteasomal Activation

Affiliations
Case Reports

Single-Cell RNA Seq in Sydenham Chorea Shows B Cell HLA-DR/DQ Upregulation and Plasma Cell Proteasomal Activation

Velda X Han et al. Ann Clin Transl Neurol. 2025 Nov.

Abstract

The pathogenesis of Sydenham chorea remains unclear. We report a 10-year-old girl presenting with subacute chorea and mild carditis following Streptococcal throat infection. Single-cell RNA sequencing on 30,794 peripheral immune cells from the patient and two sex-matched controls revealed nine immune cell clusters. We found up-regulated antigen processing pathways in B cells, monocytes, and eosinophils, enriched by HLA genes, particularly HLA-DRB5 and HLA-DQB1, and immunoglobulin (IGH) genes in B cells. Up-regulated proteasomal pathways in plasma cells were enriched by PSM genes. These insights support the B cell-mediated autoantibody hypothesis in Sydenham chorea. We highlight the potential of scRNA-seq in rare diseases to inform targeted therapies.

Keywords: autoimmune brain disorder; neuroimmunology; neuropsychiatric; transcriptomics.

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Conflict of interest statement

The authors declare no conflicts of interest.

Figures

FIGURE 1
FIGURE 1
(A) Dot plot of top 5 up‐ and down‐regulated GSEA GO pathways across cell types in SC patient vs. control. Significant pathways (FDR < 0.05) were simplified [9], and only those that were present in > 2 cell types were plotted. In SC patient vs. control, antigen processing, MHC protein complex pathways were up‐regulated in classical monocytes, eosinophils, and B cells, and down‐regulated in plasma B cells. Other innate immune pathways (‘defence response to other organisms’) were up‐regulated in neutrophils, but down‐regulated in CD8 T cells and plasma B cells. (B) Connectivity network plot of the up‐regulated ‘antigen binding’ pathway in classical monocytes, eosinophils, and B cells was plotted. The antigen binding pathways were enriched by HLA genes (HLA‐DR and HLA‐DQ genes) across cell types and immunoglobulin heavy and light chain (IGH, IGL genes) in B cells.
FIGURE 2
FIGURE 2
(A) Bar chart of top 5 up‐ and down‐regulated Gene Set Enrichment Analysis (GSEA) Gene Ontology (GO) pathways in plasma B cells. (B) Connectivity network plot of the up‐regulated ‘proteasomal complex’ pathway in plasma B cells was plotted, enriched by PSM genes, which are proteasomal structural and regulatory genes.

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