Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation
. 2025 Sep 15.
doi: 10.1002/glia.70084. Online ahead of print.

Altered Inflammatory Signature in a C9ORF72-ALS iPSC-Derived Motor Neuron and Microglia Coculture Model

Affiliations

Altered Inflammatory Signature in a C9ORF72-ALS iPSC-Derived Motor Neuron and Microglia Coculture Model

Yujing Gao et al. Glia. .

Abstract

Amyotrophic lateral sclerosis (ALS) is a complex neurodegenerative disorder involving multiple cell types in the central nervous system. The key pathological features of ALS include the degeneration of motor neurons and the initiation and propagation of neuroinflammation mediated by nonneuronal cell types such as microglia. Currently, the specific mechanisms underlying the involvement of microglia in neuroinflammation in ALS are unclear. Consequently, we generated several human-induced pluripotent stem cell (iPSC) derived motor neuron and microglia cocultures. We utilized ALS patient-derived iPSCs carrying a common genetic variant, the hexanucleotide repeat expansion (HRE) in C9ORF72, as well as C9ORF72 knockout (KO) iPSC lines. iPSC-derived motor neurons and microglia demonstrated expression of cell type-specific markers and were functional. Phenotypic assessments on motor neurons and microglia in mono- and cocultures identified dysfunction in the expression and secretion of inflammatory cytokines and chemokines in lipopolysaccharide (LPS)-stimulated C9ORF72 HRE and C9ORF72 KO microglia. Analysis of single-cell RNA sequencing data from microglia and motor neuron cocultures revealed cell type-specific transcriptomic changes. Specifically, we detected the removal of an LPS-responsive microglia subpopulation, correlating with a dampened inflammatory response in C9ORF72 HRE and C9ORF72 KO microglia. Overall, our results support the critical role of microglia-mediated neuroinflammation in ALS pathology, and our iPSC-derived models should prove a valuable platform for further mechanistic studies of ALS-associated pathways.

Keywords: ALS; coculture; iPSCs; microglia; motor neuron; neuroinflammation; single‐cell RNA sequencing.

PubMed Disclaimer

References

    1. Abo‐Rady, M., N. Kalmbach, A. Pal, et al. 2020. “Knocking Out C9ORF72 Exacerbates Axonal Trafficking Defects Associated With Hexanucleotide Repeat Expansion and Reduces Levels of Heat Shock Proteins.” Stem Cell Reports 14, no. 3: 390–405. https://doi.org/10.1016/j.stemcr.2020.01.010.
    1. Banerjee, P., A. R. Mehta, R. S. Nirujogi, et al. 2023. “Cell‐Autonomous Immune Dysfunction Driven by Disrupted Autophagy in C9orf72‐ALS iPSC‐Derived Microglia Contributes to Neurodegeneration.” Science Advances 9, no. 16: eabq0651. https://doi.org/10.1126/sciadv.abq0651.
    1. Beckers, J., A. K. Tharkeshwar, L. Fumagalli, et al. 2023. “A Toxic Gain‐Of‐Function Mechanism in C9orf72 ALS Impairs the Autophagy‐Lysosome Pathway in Neurons.” Acta Neuropathologica Communications 11, no. 1: 151. https://doi.org/10.1186/s40478‐023‐01648‐0.
    1. Bursch, F., N. Kalmbach, M. Naujock, et al. 2019. “Altered Calcium Dynamics and Glutamate Receptor Properties in iPSC‐Derived Motor Neurons From ALS Patients With C9orf72, FUS, SOD1 or TDP43 Mutations.” Human Molecular Genetics 28, no. 17: 2835–2850. https://doi.org/10.1093/hmg/ddz107.
    1. Butti, Z., and S. A. Patten. 2018. “RNA Dysregulation in Amyotrophic Lateral Sclerosis.” Frontiers in Genetics 9: 712. https://doi.org/10.3389/fgene.2018.00712.

Grants and funding

LinkOut - more resources