A linear equation that describes the steady-state kinetics of enzymes and subcellular particles interacting with tightly bound inhibitors
- PMID: 4263188
- PMCID: PMC1178592
- DOI: 10.1042/bj1270321
A linear equation that describes the steady-state kinetics of enzymes and subcellular particles interacting with tightly bound inhibitors
Abstract
When an enzyme exhibits a high affinity for an inhibitor, the steady-state analysis of the mechanism is complicated by the non-linearity of normal dose-response plots or of reciprocal replots. It is shown here that dose-response measurements generate a linear plot of inhibitor concentration divided by degree of inhibition against velocity without inhibitor divided by velocity with inhibitor; the concentration of enzyme may be derived from the extrapolated intercept of such plots, and the mechanism of inhibition from replots of the variation of the slope with substrate concentration. The limiting cases where virtually all inhibitor molecules are bound or virtually all are free are described, together with the situation when a significant proportion of the substrate becomes bound. This type of analysis indicates that the inhibitors of oxidative phosphorylation, rutamycin and bongkrekic acid, are tightly bound to rat liver mitochondria.
Similar articles
-
Simplified velocity equations for characterizing the partial inhibition or nonessential activation of bireactant enzymes.J Enzyme Inhib. 2000;15(4):311-33. doi: 10.1080/14756360009040691. J Enzyme Inhib. 2000. PMID: 10995065
-
Kinetics of enzymes subject to very strong product inhibition: analysis using simplified integrated rate equations and average velocities.J Theor Biol. 1983 Feb 21;100(4):597-611. doi: 10.1016/0022-5193(83)90325-9. J Theor Biol. 1983. PMID: 6876816
-
Steady-state enzyme kinetics with high-affinity substrates or inhibitors. A statistical treatment of dose-response curves.Biochem J. 1973 Sep;135(1):101-7. doi: 10.1042/bj1350101. Biochem J. 1973. PMID: 4204669 Free PMC article.
-
Mechanistic and kinetic studies of inhibition of enzymes.Cell Biochem Biophys. 2000;33(3):217-25. doi: 10.1385/cbb:33:3:217. Cell Biochem Biophys. 2000. PMID: 11325042 Review.
-
The many faces of partial inhibition: Revealing imposters with graphical analysis.Arch Biochem Biophys. 2018 Sep 1;653:10-23. doi: 10.1016/j.abb.2018.06.009. Epub 2018 Jun 22. Arch Biochem Biophys. 2018. PMID: 29936084 Review.
Cited by
-
Water mediated ligand functional group cooperativity: the contribution of a methyl group to binding affinity is enhanced by a COO(-) group through changes in the structure and thermodynamics of the hydration waters of ligand-thermolysin complexes.J Med Chem. 2012 Oct 11;55(19):8283-302. doi: 10.1021/jm300472k. Epub 2012 Sep 19. J Med Chem. 2012. PMID: 22894131 Free PMC article.
-
Human liver cathepsin L.Biochem J. 1985 Feb 15;226(1):233-41. doi: 10.1042/bj2260233. Biochem J. 1985. PMID: 3977867 Free PMC article.
-
Disulfiram inhibition of the alternative respiratory pathway in plant mitochondria.Plant Physiol. 1981 Aug;68(2):393-400. doi: 10.1104/pp.68.2.393. Plant Physiol. 1981. PMID: 16661923 Free PMC article.
-
A Charge-Switchable Zwitterionic Peptide for Rapid Detection of SARS-CoV-2 Main Protease.Angew Chem Int Ed Engl. 2022 Feb 21;61(9):e202112995. doi: 10.1002/anie.202112995. Epub 2022 Jan 14. Angew Chem Int Ed Engl. 2022. PMID: 34936725 Free PMC article.
-
Tailoring the specificity of a plant cystatin toward herbivorous insect digestive cysteine proteases by single mutations at positively selected amino acid sites.Plant Physiol. 2008 Mar;146(3):1010-9. doi: 10.1104/pp.108.115741. Epub 2008 Jan 11. Plant Physiol. 2008. PMID: 18192440 Free PMC article.
References
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources