Reciprocal cooperative effects of multiple ligand binding to pyruvate kinase
- PMID: 557338
- DOI: 10.1021/bi00626a016
Reciprocal cooperative effects of multiple ligand binding to pyruvate kinase
Abstract
The formation of multiple ligand complexes with muscle pyruvate kinase was measured in terms of dissociation constants and the standard free energies of formation were calculated. The binding of Mn2+ to the enzyme (KA = 55 +/- 5 X 10(-6) M; deltaF degrees = -5.75 +/- 0.05 kcal/mol) and to the enzyme saturated with phosphoenolpyruvate (conditional free energy) KA' = 0.8 +/- 0.4 X 10(-6) M; deltaF degrees = -8.22 +/- 0.34 kcal/mol) has been measured under identical conditions giving a free energy of coupling, delta(deltaF degrees) = -2.47 +/- 0.34 kcal/mol. Such a large negative free energy of coupling is diagnostic of a strong positively cooperative effect in ligand binding. The binding of the substrate phosphoenolpyruvate to free enzyme and the enzyme-Mn2+ complex was, by necessity, measured by different methods. The free energy of phosphoenolpyruvate binding to free enzyme (KS = 1.58 +/- 0.10 X 10(-4)M; deltaF degrees = -5.13 +/- 0.04 kcal/mol) and to the enzyme-Mn2+ complex (K3 = 0.75 +/- 0.10 X 10(-6)M; deltaF degrees = -8.26 +/- 0.07 kcal/mol) also gives a large negative free energy of coupling, delta(deltaF degrees) = -3.16 +/- 0.08 kcal/mol. Such a large negative value confirms reciprocal binding effects between the divalent cation and the substrate phosphoenolpyruvate. The binding of Mn2+ to the enzyme-ADP complex was also investigated and a free energy of coupling, delta(deltaF degrees) = -0.08 +/- 0.08 kcal/mol, was measured, indicative of little or no cooperativity in binding. The free energy of coupling with Mn2+ and pyruvate was measured as -1.52 +/- 0.14 kcal/mol, showing a significant amount of cooperativity in ligand binding but a substantially smaller effect than that observed for phosphoenolpyruvate binding. The magnitude of the coupling free energy may be related to the role of the divalent cation in the formation of the enzyme-substrate complexes. In the absence of the activating monovalent cation, the coupling free energies for phosphoenolpyruvate and pyruvate binding decrease by 40-60% and 25%, respectively, substantiating a role for the monovalent cation in the formation of enzyme-substrate complexes with phosphoenolpyruvate and with pyruvate.
Similar articles
-
Metal-ion-mediated allosteric triggering of yeast pyruvate kinase. 2. A multidimensional thermodynamic linked-function analysis.Biochemistry. 1997 Jun 3;36(22):6803-13. doi: 10.1021/bi962870s. Biochemistry. 1997. PMID: 9184163
-
Metal-ion-mediated allosteric triggering of yeast pyruvate kinase. 1. A multidimensional kinetic linked-function analysis.Biochemistry. 1997 Jun 3;36(22):6792-802. doi: 10.1021/bi962869t. Biochemistry. 1997. PMID: 9184162
-
Thermodynamic linked-function analysis of Mg(2+)-activated yeast pyruvate kinase.Biochemistry. 2001 Oct 30;40(43):13088-96. doi: 10.1021/bi010125w. Biochemistry. 2001. PMID: 11669647
-
Can free energy transduction be localized at some crucial part of the enzymatic cycle?Q Rev Biophys. 1981 Nov;14(4):463-511. doi: 10.1017/s0033583500002468. Q Rev Biophys. 1981. PMID: 7034036 Review.
-
Computational methods to predict binding free energy in ligand-receptor complexes.J Med Chem. 1995 Dec 22;38(26):4953-67. doi: 10.1021/jm00026a001. J Med Chem. 1995. PMID: 8544170 Review. No abstract available.
Cited by
-
Pyruvate kinase: activation by and catalytic role of the monovalent and divalent cations.Mol Cell Biochem. 1981 Mar 13;35(2):65-75. doi: 10.1007/BF02354821. Mol Cell Biochem. 1981. PMID: 7015112 Review.
-
Divalent cations in human liver pyruvate kinase exemplify the combined effects of complex-equilibrium and allosteric regulation.Sci Rep. 2023 Jun 29;13(1):10557. doi: 10.1038/s41598-023-36943-2. Sci Rep. 2023. PMID: 37386072 Free PMC article.
-
Errors in the evaluation of Arrhenius and van't Hoff plots.Biochem J. 1983 Jan 1;209(1):277-80. doi: 10.1042/bj2090277. Biochem J. 1983. PMID: 6847616 Free PMC article.
-
Fructose-1,6-bisphosphate couples glycolytic flux to activation of Ras.Nat Commun. 2017 Oct 13;8(1):922. doi: 10.1038/s41467-017-01019-z. Nat Commun. 2017. PMID: 29030545 Free PMC article.
-
The impact of ions on allosteric functions in human liver pyruvate kinase.Methods Enzymol. 2009;466:83-107. doi: 10.1016/S0076-6879(09)66005-5. Epub 2009 Nov 13. Methods Enzymol. 2009. PMID: 21609859 Free PMC article.