[Secondary and topographic structure of ribosomal RNA 16S of Escherichia coli]
- PMID: 6784944
[Secondary and topographic structure of ribosomal RNA 16S of Escherichia coli]
Abstract
We present a model for the secondary structure of 16S ribosomal RNA from E. coli. This model has been deduced by restricting the total number of theoretical base pairings using the following criteria: (1) susceptibility of residues towards enzymatic probes that are specific for either paired or single stranded regions; (2) reactivity of certain residues to chemical modification; (3) evidence for medium and long range interactions; (4) comparative analysis of ribosomal RNA sequences from other organisms.
Similar articles
-
Structural organization of the 16S ribosomal RNA from E. coli. Topography and secondary structure.Nucleic Acids Res. 1981 May 11;9(9):2153-72. doi: 10.1093/nar/9.9.2153. Nucleic Acids Res. 1981. PMID: 6170942 Free PMC article.
-
[Mapping of the 16S rRNA regions in ribosomes capable of complementary binding of oligonucleotides].Biokhimiia. 1981 Dec;46(12):2250-6. Biokhimiia. 1981. PMID: 6274438 Russian.
-
Secondary structure model for bacterial 16S ribosomal RNA: phylogenetic, enzymatic and chemical evidence.Nucleic Acids Res. 1980 May 24;8(10):2275-93. doi: 10.1093/nar/8.10.2275. Nucleic Acids Res. 1980. PMID: 6159576 Free PMC article.
-
[Role of ribonucleic acids in organizing the structure of Escherichia coli ribosomes].Mol Biol (Mosk). 1978 Jul-Aug;12(4):725-36. Mol Biol (Mosk). 1978. PMID: 355862 Review. Russian.
-
[Study of ribosome structure using the biochemical methods: judgment day].Mol Biol (Mosk). 2001 Jul-Aug;35(4):559-83. Mol Biol (Mosk). 2001. PMID: 11524944 Review. Russian.
Cited by
-
The 3'-terminal region of bacterial 23S ribosomal RNA: structure and homology with the 3'-terminal region of eukaryotic 28S rRNA and with chloroplast 4.5s rRNA.Nucleic Acids Res. 1981 Apr 10;9(7):1533-49. doi: 10.1093/nar/9.7.1533. Nucleic Acids Res. 1981. PMID: 6164989 Free PMC article.
-
Secondary structure of the large subunit ribosomal RNA from Escherichia coli, Zea mays chloroplast, and human and mouse mitochondrial ribosomes.Nucleic Acids Res. 1981 Jul 24;9(14):3287-306. doi: 10.1093/nar/9.14.3287. Nucleic Acids Res. 1981. PMID: 7024913 Free PMC article.
-
Secondary structure comparisons between small subunit ribosomal RNA molecules from six different species.Nucleic Acids Res. 1981 Aug 11;9(15):3621-40. doi: 10.1093/nar/9.15.3621. Nucleic Acids Res. 1981. PMID: 7024918 Free PMC article.
-
The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs.BMC Bioinformatics. 2002;3:2. doi: 10.1186/1471-2105-3-2. Epub 2002 Jan 17. BMC Bioinformatics. 2002. PMID: 11869452 Free PMC article.
-
Evolutionary rates vary among rRNA structural elements.Nucleic Acids Res. 2007;35(10):3339-54. doi: 10.1093/nar/gkm101. Epub 2007 Apr 27. Nucleic Acids Res. 2007. PMID: 17468501 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Molecular Biology Databases