Long PCR-ribotyping of nontypeable Haemophilus influenzae
- PMID: 7542264
- PMCID: PMC228129
- DOI: 10.1128/jcm.33.5.1192-1195.1995
Long PCR-ribotyping of nontypeable Haemophilus influenzae
Abstract
PCR-ribotyping, a new typing method based on long PCR, has been developed for nontypeable Haemophilus influenzae (NTHi). Ribosomal operons of NTHi were amplified by long PCR and were found to be highly polymorphic for internal HaeIII sites. The technique was applied to 49 isolates previously subjected to conventional ribotyping, and the two methods showed a high level of concordance for serial isolates from individual subjects. PCR-ribotyping provides a powerful new typing tool for strain characterization in epidemiological investigations of NTHi.
Similar articles
-
Ribotyping, biotyping and capsular typing of Haemophilus influenzae strains isolated from patients in Campinas, southeast Brazil.Braz J Infect Dis. 2008 Oct;12(5):430-7. doi: 10.1590/s1413-86702008000500015. Braz J Infect Dis. 2008. PMID: 19219284
-
Source of variation detected in ribotyping patterns of Haemophilus influenzae: comparison of traditional ribotyping, PCR-ribotyping and rDNA restriction analysis.J Med Microbiol. 1997 Sep;46(9):763-72. doi: 10.1099/00222615-46-9-763. J Med Microbiol. 1997. PMID: 9291888
-
Use of pulsed-field gel electrophoresis, enterobacterial repetitive intergenic consensus typing, and automated ribotyping to assess genomic variability among strains of nontypeable Haemophilus influenzae.J Clin Microbiol. 2002 Feb;40(2):660-2. doi: 10.1128/JCM.40.2.660-662.2002. J Clin Microbiol. 2002. PMID: 11825990 Free PMC article.
-
The minimal cell genome: "on being the right size".Proc Natl Acad Sci U S A. 1996 Sep 17;93(19):10004-6. doi: 10.1073/pnas.93.19.10004. Proc Natl Acad Sci U S A. 1996. PMID: 8816738 Free PMC article. Review. No abstract available.
-
Risk assessment models and contamination management: implications for broad-range ribosomal DNA PCR as a diagnostic tool in medical bacteriology.J Clin Microbiol. 2002 May;40(5):1575-80. doi: 10.1128/JCM.40.5.1575-1580.2002. J Clin Microbiol. 2002. PMID: 11980924 Free PMC article. Review. No abstract available.
Cited by
-
Comparative genomic analyses of seventeen Streptococcus pneumoniae strains: insights into the pneumococcal supragenome.J Bacteriol. 2007 Nov;189(22):8186-95. doi: 10.1128/JB.00690-07. Epub 2007 Aug 3. J Bacteriol. 2007. PMID: 17675389 Free PMC article.
-
Haemophilus influenzae: then and now.Eur J Clin Microbiol Infect Dis. 1995 Nov;14(11):935-48. doi: 10.1007/BF01691374. Eur J Clin Microbiol Infect Dis. 1995. PMID: 8654443
-
Extensive genomic plasticity in Pseudomonas aeruginosa revealed by identification and distribution studies of novel genes among clinical isolates.Infect Immun. 2006 Sep;74(9):5272-83. doi: 10.1128/IAI.00546-06. Infect Immun. 2006. PMID: 16926421 Free PMC article.
-
Geographic consistency in dominant, non-typeable Haemophilus influenzae genotypes colonising four distinct Australian paediatric groups: a cohort study.Pneumonia (Nathan). 2016 Aug 18;8:13. doi: 10.1186/s41479-016-0013-y. eCollection 2016. Pneumonia (Nathan). 2016. PMID: 28702292 Free PMC article.
-
Characterization and modeling of the Haemophilus influenzae core and supragenomes based on the complete genomic sequences of Rd and 12 clinical nontypeable strains.Genome Biol. 2007;8(6):R103. doi: 10.1186/gb-2007-8-6-r103. Genome Biol. 2007. PMID: 17550610 Free PMC article.
References
Publication types
MeSH terms
Substances
Associated data
- Actions
- Actions
LinkOut - more resources
Full Text Sources
Molecular Biology Databases