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. 1994 Sep;10(5):545-6.
doi: 10.1093/bioinformatics/10.5.545.

PdbMotif--a tool for the automatic identification and display of motifs in protein structures

M A Saqi  1 , R Sayle
Affiliations

PdbMotif--a tool for the automatic identification and display of motifs in protein structures

M A Saqi et al. Comput Appl Biosci. 1994 Sep.

Abstract

A program PdbMotif, which automatically identifies protein motifs in a protein data bank file and generates a script file which can be read directly by the molecular rendering program RasMol, is described. PdbMotif accepts the standard PROSITE pattern syntax and will scan the PROSITE pattern database or a set of user defined patterns. Any motifs detected are automatically highlighted in the RasMol image.

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