Translational frameshifting at the gag-pol junction of human immunodeficiency virus type 1 is not increased in infected T-lymphoid cells
- PMID: 7906312
- PMCID: PMC236606
- DOI: 10.1128/JVI.68.3.1501-1508.1994
Translational frameshifting at the gag-pol junction of human immunodeficiency virus type 1 is not increased in infected T-lymphoid cells
Abstract
A frameshift event is necessary for expression of the products of the pol gene in a number of retroviruses, including human immunodeficiency virus type 1 (HIV-1). The basic signals necessary for frameshifting consist of a shifty sequence in which the ribosome slips and a downstream stimulatory structure which can be either a stem-loop or a pseudoknot. In HIV-1, much attention has been paid to the frameshift site itself, and only recently has the role of the downstream structure been examined. Here we used a luciferase-based experimental system to analyze in vivo the cis and trans factors potentially involved in controlling frameshifting efficiency at the gag-pol junction of HIV-1. We demonstrated that high-level frameshifting is dependent on the presence of a palindromic region located downstream of the site where the frameshift event takes place. Frameshifting efficiencies were found to be identical in mouse fibroblasts and the natural host cells of the virus, i.e., CD4+ human lymphoid cells. Furthermore, no increase in frameshifting was observed upon virus infection. Previous observations have shown that viral infection leads to specific alteration of tRNAs involved in translation of shifty sites (D. Hatfield, Y.-X. Feng, B.J. Lee, A. Rein, J.G. Levin, and S. Oroszlan, Virology 173:736-742, 1989). The results presented here strongly suggest that these modifications do not affect frameshifting efficiency.
Similar articles
-
Identification and analysis of the gag-pol ribosomal frameshift site of feline immunodeficiency virus.Virology. 1992 Feb;186(2):389-97. doi: 10.1016/0042-6822(92)90004-9. Virology. 1992. PMID: 1310175 Free PMC article.
-
The virion-associated Gag-Pol is decreased in chimeric Moloney murine leukemia viruses in which the readthrough region is replaced by the frameshift region of the human immunodeficiency virus type 1.Virology. 2005 Apr 10;334(2):342-52. doi: 10.1016/j.virol.2005.01.044. Virology. 2005. PMID: 15780884
-
A review on architecture of the gag-pol ribosomal frameshifting RNA in human immunodeficiency virus: a variability survey of virus genotypes.J Biomol Struct Dyn. 2017 Jun;35(8):1629-1653. doi: 10.1080/07391102.2016.1194231. Epub 2016 Aug 2. J Biomol Struct Dyn. 2017. PMID: 27485859 Review.
-
Characterization of the frameshift stimulatory signal controlling a programmed -1 ribosomal frameshift in the human immunodeficiency virus type 1.Nucleic Acids Res. 2002 Dec 1;30(23):5094-102. doi: 10.1093/nar/gkf657. Nucleic Acids Res. 2002. PMID: 12466532 Free PMC article.
-
Programmed ribosomal frameshifting in HIV-1 and the SARS-CoV.Virus Res. 2006 Jul;119(1):29-42. doi: 10.1016/j.virusres.2005.10.008. Epub 2005 Nov 28. Virus Res. 2006. PMID: 16310880 Free PMC article. Review.
Cited by
-
A reassessment of the response of the bacterial ribosome to the frameshift stimulatory signal of the human immunodeficiency virus type 1.RNA. 2004 Aug;10(8):1225-35. doi: 10.1261/rna.7670704. Epub 2004 Jul 9. RNA. 2004. PMID: 15247429 Free PMC article.
-
Modulation of HIV-1 Gag/Gag-Pol frameshifting by tRNA abundance.Nucleic Acids Res. 2019 Jun 4;47(10):5210-5222. doi: 10.1093/nar/gkz202. Nucleic Acids Res. 2019. PMID: 30968122 Free PMC article.
-
The Q-base of asparaginyl-tRNA is dispensable for efficient -1 ribosomal frameshifting in eukaryotes.J Mol Biol. 2000 Jan 14;295(2):179-91. doi: 10.1006/jmbi.1999.3361. J Mol Biol. 2000. PMID: 10623518 Free PMC article.
-
Different modes of stop codon restriction by the Stylonychia and Paramecium eRF1 translation termination factors.Proc Natl Acad Sci U S A. 2007 Jun 26;104(26):10824-9. doi: 10.1073/pnas.0703887104. Epub 2007 Jun 15. Proc Natl Acad Sci U S A. 2007. PMID: 17573528 Free PMC article.
-
Ribosomal frameshifting and transcriptional slippage: From genetic steganography and cryptography to adventitious use.Nucleic Acids Res. 2016 Sep 6;44(15):7007-78. doi: 10.1093/nar/gkw530. Epub 2016 Jul 19. Nucleic Acids Res. 2016. PMID: 27436286 Free PMC article. Review.
References
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Research Materials