In human chromosomes telomeric regions are enriched in CpGs relative to R-bands
- PMID: 8149811
- DOI: 10.1007/BF00650897
In human chromosomes telomeric regions are enriched in CpGs relative to R-bands
Abstract
Human chromosomes were in situ nick-translated using as nicking agents the endonucleases MspI (CCGG), its methyl-sensitive isoschizomer HpaII, HaeIII (GGCC), SacII (CCGCGG), EcoRI (GAATTC) and DNaseI. We show that in metaphase chromosomes R-bands are enriched, as compared with G-bands, in the dinucleotide CpG but no more than what is expected on the basis of their relative G+C content. The telomeric regions, on the contrary, besides having a chromatin conformation that is particularly relaxed and accessible to endonucleases, also show an enrichment in CpGs.
Similar articles
-
Digestion of human chromosomes by means of the isoschizomers MspI and HpaII.Genome. 1994 Oct;37(5):770-4. doi: 10.1139/g94-110. Genome. 1994. PMID: 7528155
-
In situ nick translation of human metaphase chromosomes with the restriction enzymes MspI and HpaII reveals an R-band pattern.Cytogenet Cell Genet. 1990;54(3-4):132-6. doi: 10.1159/000132976. Cytogenet Cell Genet. 1990. PMID: 1702378
-
Effect of HpaII and MspI restriction endonucleases on chronic myelogenous leukemia chromosomes. Detection of CpG dinucleotide demethylation in situ.Cancer Genet Cytogenet. 1988 Sep;34(2):251-6. doi: 10.1016/0165-4608(88)90268-3. Cancer Genet Cytogenet. 1988. PMID: 2457428
-
Methylation-sensitive restriction endonuclease digestion patterns revealed in Vicia faba L. chromosomes by in situ nick-translation.Folia Histochem Cytobiol. 1999;37(4):267-74. Folia Histochem Cytobiol. 1999. PMID: 10598329
-
The distribution of genes on chromosomes: a cytological approach.J Mol Evol. 1993 Aug;37(2):117-22. doi: 10.1007/BF02407346. J Mol Evol. 1993. PMID: 8411200 Review.
Cited by
-
The relationship between DNA methylation and chromosome imprinting in the coccid Planococcus citri.Genetics. 1999 Apr;151(4):1471-8. doi: 10.1093/genetics/151.4.1471. Genetics. 1999. PMID: 10101170 Free PMC article.