Identification of arginine 331 as an important active site residue in the class II fructose-1,6-bisphosphate aldolase of Escherichia coli
- PMID: 8771208
- PMCID: PMC2143241
- DOI: 10.1002/pro.5560050119
Identification of arginine 331 as an important active site residue in the class II fructose-1,6-bisphosphate aldolase of Escherichia coli
Abstract
Treatment of the Class II fructose-1,6-bisphosphate aldolase of Escherichia coli with the arginine-specific alpha-dicarbonyl reagents, butanedione or phenylglyoxal, results in inactivation of the enzyme. The enzyme is protected from inactivation by the substrate, fructose 1,6-bisphosphate, or by inorganic phosphate. Modification with [7-14C] phenylglyoxal in the absence of substrate demonstrates that enzyme activity is abolished by the incorporation of approximately 2 moles of reagent per mole of enzyme. Sequence alignment of the eight known Class II FBP-aldolases shows that only one arginine residue is conserved in all the known sequences. This residue, Arg-331, was mutated to either alanine or glutamic acid. The mutant enzymes were much less susceptible to inactivation by phenylglyoxal. Measurement of the steady-state kinetic parameters revealed that mutation of Arg-331 dramatically increased the K(m) for fructose 1,6-bisphosphate. Comparatively small differences in the inhibitor constant Ki for dihydroxyacetone phosphate or its analogue, 2-phosphoglycolate, were found between the wild-type and mutant enzymes. In contrast, the mutation caused large changes in the kinetic parameters when glyceraldehyde 3-phosphate was used as an inhibitor. Kinetic analysis of the oxidation of the carbanionic aldolase-substrate intermediate of the reaction by hexacyanoferrate (III) revealed that the K(m) for dihydroxyacetone phosphate was again unaffected, whereas that for fructose 1,6-bisphosphate was dramatically increased. Taken together, these results show that Arg-331 is critically involved in the binding of fructose bisphosphate by the enzyme and demonstrate that it interacts with the C-6 phosphate group of the substrate.
Similar articles
-
A functional role for a flexible loop containing Glu182 in the class II fructose-1,6-bisphosphate aldolase from Escherichia coli.J Mol Biol. 2002 Jan 11;315(2):131-40. doi: 10.1006/jmbi.2001.5237. J Mol Biol. 2002. PMID: 11779234
-
Conserved residues in the mechanism of the E. coli Class II FBP-aldolase.J Mol Biol. 1999 Jan 15;285(2):843-55. doi: 10.1006/jmbi.1998.2376. J Mol Biol. 1999. PMID: 9878448
-
Exploring substrate binding and discrimination in fructose1, 6-bisphosphate and tagatose 1,6-bisphosphate aldolases.Eur J Biochem. 2000 Mar;267(6):1858-68. doi: 10.1046/j.1432-1327.2000.01191.x. Eur J Biochem. 2000. PMID: 10712619
-
Structure, function and evolution of the Archaeal class I fructose-1,6-bisphosphate aldolase.Biochem Soc Trans. 2004 Apr;32(Pt 2):259-63. doi: 10.1042/bst0320259. Biochem Soc Trans. 2004. PMID: 15046584 Review.
-
Topography and conformational changes of fructose-1,6-bisphosphate aldolase.Acta Biochim Pol. 1991;38(4):407-21. Acta Biochim Pol. 1991. PMID: 1814134 Review.
Cited by
-
The dhnA gene of Escherichia coli encodes a class I fructose bisphosphate aldolase.Biochem J. 1998 Apr 15;331 ( Pt 2)(Pt 2):437-45. doi: 10.1042/bj3310437. Biochem J. 1998. PMID: 9531482 Free PMC article.
-
Modifying the stereochemistry of an enzyme-catalyzed reaction by directed evolution.Proc Natl Acad Sci U S A. 2003 Mar 18;100(6):3143-8. doi: 10.1073/pnas.0635924100. Epub 2003 Mar 7. Proc Natl Acad Sci U S A. 2003. PMID: 12626743 Free PMC article.
-
Thermal Ring-Based Heat Switches in Hyperthermophilic Class II Bacterial Fructose Aldolase.ACS Omega. 2023 Jun 27;8(27):24624-24634. doi: 10.1021/acsomega.3c03001. eCollection 2023 Jul 11. ACS Omega. 2023. PMID: 37457467 Free PMC article.
-
Aldolases Utilize Different Oligomeric States To Preserve Their Functional Dynamics.Biochemistry. 2015 Jun 9;54(22):3543-54. doi: 10.1021/acs.biochem.5b00042. Epub 2015 May 27. Biochemistry. 2015. PMID: 25982518 Free PMC article.
-
Crystal structures of the metal-dependent 2-dehydro-3-deoxy-galactarate aldolase suggest a novel reaction mechanism.EMBO J. 2000 Aug 1;19(15):3849-56. doi: 10.1093/emboj/19.15.3849. EMBO J. 2000. PMID: 10921867 Free PMC article.
References
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases
Miscellaneous