Linkage map of Syrian hamster with restriction landmark genomic scanning
- PMID: 9060411
- DOI: 10.1007/s003359900370
Linkage map of Syrian hamster with restriction landmark genomic scanning
Abstract
We have constructed the linkage map with precise genetic analysis of the Syrian hamster, Mesocricetus auratus, according to the restriction landmark genomic scanning (RLGS) spot mapping method. Although only 3.2-6.6% of the total RLGS spots between the two strains, ACN and BIO 14.6, showed genetic variance, 572 loci were found to be polymorphic. Out of 569 RLGS loci and 3 other loci, 531 were mapped with the backcross (ACN x BIO 14.6) F1 x BIO 14.6. The cumulative map was 1111.6 cM, indicating that the spots/loci are located throughout the genome at 1.94 cM intervals on average. Thus, RLGS provides us with a rapid tool to construct the genetic map of any species, even if it has less genetic variation.
Similar articles
-
A genetic linkage map of the Syrian hamster and localization of cardiomyopathy locus on chromosome 9qa2.1-b1 using RLGS spot-mapping.Nat Genet. 1996 May;13(1):87-90. doi: 10.1038/ng0596-87. Nat Genet. 1996. PMID: 8673110
-
Application of the RLGS image analysis tool (RAT) to the construction of a genetic linkage map of recombinant inbred strain SMXA.Mamm Genome. 1999 Jun;10(6):611-6. doi: 10.1007/s003359901055. Mamm Genome. 1999. PMID: 10341096
-
A genetic linkage map of the mouse using restriction landmark genomic scanning (RLGS).Genetics. 1994 Dec;138(4):1207-38. doi: 10.1093/genetics/138.4.1207. Genetics. 1994. PMID: 7896102 Free PMC article.
-
High-speed positional cloning based on restriction landmark genome scanning.Methods. 1997 Dec;13(4):359-77. doi: 10.1006/meth.1997.0544. Methods. 1997. PMID: 9480782 Review.
-
Genetic mapping of restriction landmark genomic scanning loci in the mouse.Electrophoresis. 1995 Feb;16(2):233-40. doi: 10.1002/elps.1150160139. Electrophoresis. 1995. PMID: 7774564 Review.
Cited by
-
Evolution of the genomic recombination rate in murid rodents.Genetics. 2011 Mar;187(3):643-57. doi: 10.1534/genetics.110.123851. Epub 2010 Dec 13. Genetics. 2011. PMID: 21149647 Free PMC article.
-
A genetic linkage map and comparative mapping of the prairie vole (Microtus ochrogaster) genome.BMC Genet. 2011 Jul 7;12:60. doi: 10.1186/1471-2156-12-60. BMC Genet. 2011. PMID: 21736755 Free PMC article.
-
First-generation linkage map of the gray, short-tailed opossum, Monodelphis domestica, reveals genome-wide reduction in female recombination rates.Genetics. 2004 Jan;166(1):307-29. doi: 10.1534/genetics.166.1.307. Genetics. 2004. PMID: 15020427 Free PMC article.
-
Positional syntenic cloning and functional characterization of the mammalian circadian mutation tau.Science. 2000 Apr 21;288(5465):483-92. doi: 10.1126/science.288.5465.483. Science. 2000. PMID: 10775102 Free PMC article.
References
Publication types
MeSH terms
LinkOut - more resources
Full Text Sources