BBReader: a computer program for the combined use of the BioMagResBank and PDB databases
- PMID: 9081539
- DOI: 10.1023/a:1018631903764
BBReader: a computer program for the combined use of the BioMagResBank and PDB databases
Abstract
A computer program ('BBReader') was developed which performs an inverse search in the BioMagResBank database. Given (cross) peak positions of a protein, the program searches for atoms with matching chemical shifts and suggests possible assignments for user-specified homo- and heteronuclear one- to three-dimensional COSY- and NOESY-type experiments. It can handle 1H, 13C and 15N spectra. Distance information from PDB files can be utilized for filtering possible NOESY cross peak assignments.
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