Guanidine hydrochloride unfolding of a transmembrane beta-strand in FepA using site-directed spin labeling
- PMID: 9655352
- PMCID: PMC2144043
- DOI: 10.1002/pro.5560070624
Guanidine hydrochloride unfolding of a transmembrane beta-strand in FepA using site-directed spin labeling
Abstract
We have used the electron spin resonance (ESR) site-directed spin-labeling (SDSL) technique to examine the guanidine hydrochloride (Gdn-HCl) induced denaturation of several sites along a transmembrane beta-strand located in the ferric enterobactin receptor, FepA. In addition, we have continued the characterization of the beta-strand previously identified by our group (Klug CS et al., 1997, Biochemistry 36:13027-13033) to extend from the periplasm to the extracellular surface loop in FepA, an integral membrane protein containing a beta-barrel motif comprised of a series of antiparallel beta-strands that is responsible for transport of the iron chelate, ferric enterobactin (FeEnt), across the outer membrane of Escherichia coli and many related enteric bacteria. We have previously shown that a large surface loop in FepA containing the FeEnt binding site denatures independently of the beta-barrel domain (Klug CS et al., 1995, Biochemistry 34:14230-14236). The SDSL approach allows examination of the unfolding at individual residues independent of the global unfolding of the protein. This work shows that sites along the beta-strand that are exposed to the aqueous lumen of the channel denature more rapidly and with higher cooperativity than the surface loop, while sites on the hydrophobic side of the beta-strand undergo a limited degree of noncooperative unfolding and do not fully denature even at high (e.g., 4 M) Gdn-HCl concentrations. We conclude that, in a transmembrane beta-strand, the local environment of a given residue plays a significant role in the loss of structure at each site.
Similar articles
-
Denaturant unfolding of the ferric enterobactin receptor and ligand-induced stabilization studied by site-directed spin labeling.Biochemistry. 1995 Oct 31;34(43):14230-6. doi: 10.1021/bi00043a030. Biochemistry. 1995. PMID: 7578022
-
Mapping of the residues involved in a proposed beta-strand located in the ferric enterobactin receptor FepA using site-directed spin-labeling.Biochemistry. 1997 Oct 21;36(42):13027-33. doi: 10.1021/bi971232m. Biochemistry. 1997. PMID: 9335564
-
A site-directed spin-labeling study of ligand-induced conformational change in the ferric enterobactin receptor, FepA.Biochemistry. 1994 Nov 15;33(45):13274-83. doi: 10.1021/bi00249a014. Biochemistry. 1994. PMID: 7947735
-
Molecular mechanism of ferricsiderophore passage through the outer membrane receptor proteins of Escherichia coli.Biometals. 2007 Jun;20(3-4):263-74. doi: 10.1007/s10534-006-9060-9. Epub 2006 Dec 22. Biometals. 2007. PMID: 17186377 Review.
-
The up-and-down beta-barrel proteins.FASEB J. 1994 Dec;8(15):1240-7. doi: 10.1096/fasebj.8.15.8001736. FASEB J. 1994. PMID: 8001736 Review.
Cited by
-
Use of Site-Directed Spin Labeling EPR Spectroscopy to Study Protein-LPS Interactions.Methods Mol Biol. 2022;2548:83-96. doi: 10.1007/978-1-0716-2581-1_6. Methods Mol Biol. 2022. PMID: 36151493 Free PMC article.
-
Biophysical characterization of the unstructured cytoplasmic domain of the human neuronal adhesion protein neuroligin 3.Biophys J. 2008 Aug;95(4):1928-44. doi: 10.1529/biophysj.107.126995. Epub 2008 May 2. Biophys J. 2008. PMID: 18456828 Free PMC article.
-
Surface loop motion in FepA.J Bacteriol. 2002 Sep;184(17):4906-11. doi: 10.1128/JB.184.17.4906-4911.2002. J Bacteriol. 2002. PMID: 12169616 Free PMC article.
-
Electron paramagnetic resonance study of structural changes in the O photointermediate of bacteriorhodopsin.J Mol Biol. 2007 Feb 23;366(3):790-805. doi: 10.1016/j.jmb.2006.12.017. Epub 2006 Dec 12. J Mol Biol. 2007. PMID: 17196982 Free PMC article.
-
Site-directed spin label EPR studies of the structure and membrane interactions of the bacterial phospholipase ExoU.Appl Magn Reson. 2024 Mar;55(1-3):279-295. doi: 10.1007/s00723-023-01620-0. Epub 2023 Oct 4. Appl Magn Reson. 2024. PMID: 39175603 Free PMC article.
References
Publication types
MeSH terms
Substances
Grants and funding
LinkOut - more resources
Full Text Sources
Miscellaneous