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A Community Effort to Develop Common Data Elements for Pre-Clinical Spinal Cord Injury Research.
Fedor BA, Torres-Espin A, Vavrek R, Martone ME, Bixby JL, Gensel JC, Lemmon V, Grethe JS, Huie JR, Ferguson AR, Fouad K; Preclinical SCI Common Data Elements (CDE) Workshop Participants. Fedor BA, et al. Among authors: grethe js. Neurotrauma Rep. 2025 Apr 28;6(1):391-401. doi: 10.1089/neur.2025.0021. eCollection 2025. Neurotrauma Rep. 2025. PMID: 40918992 Free PMC article. Review.
The Data Distillery: A Graph Framework for Semantic Integration and Querying of Biomedical Data.
Ahooyi TM, Stear B, Simmons JA, Metzger VT, Kumar P, Evangelista JE, Clarke DJB, Xie Z, Kim H, Jenkins SL, Maurya MR, Ramachandran S, Fahy E, Gillespie TH, Imam FT, Kokash N, Roth ME, Fullem R, Jevtic D, Mihajlovic A, Tiemeyer M, Bakker C, Schroeder AJ, Markowski J, Nedzel J, Hill DD, Terry J, Nemarich C, Boline J, Park PJ, Ardlie KG, Vora J, Mazumder R, Ranzinger R, de Bono B, Subramaniam S, Grethe JS, Yang JJ, Lambert CG, Resnick A, Milosavljevic A, Ma'ayan A, Silverstein JC, Taylor DM. Ahooyi TM, et al. Among authors: grethe js. bioRxiv [Preprint]. 2025 Oct 16:2025.08.11.666099. doi: 10.1101/2025.08.11.666099. bioRxiv. 2025. PMID: 40832351 Free PMC article. Preprint.
Developing a Multiscale Neural Connectivity Knowledgebase of the Autonomic Nervous System.
Imam FT, Gillespie TH, Ziogas I, Surles-Zeigler MC, Tappan S, Ozyurt BI, Boline J, de Bono B, Grethe JS, Martone ME. Imam FT, et al. Among authors: grethe js. bioRxiv [Preprint]. 2024 Nov 28:2024.10.25.620360. doi: 10.1101/2024.10.25.620360. bioRxiv. 2024. Update in: Front Neuroinform. 2025 Mar 14;19:1541184. doi: 10.3389/fninf.2025.1541184. PMID: 39651195 Free PMC article. Updated. Preprint.
Data reporting quality and semantic interoperability increase with community-based data elements (CoDEs). Analysis of the open data commons for spinal cord injury (ODC-SCI).
Sheoran A, Fond KA, Davis LM, Huie JR, Vavrek R, Axtman PJ, Lemmon V, Bixby JL, Visser U, Gensel JC, Fouad K, Ferguson AR, Grethe JS, Bandrowski A, Martone ME, Torres-Espin A. Sheoran A, et al. Among authors: grethe js. Exp Neurol. 2025 Mar;385:115100. doi: 10.1016/j.expneurol.2024.115100. Epub 2024 Dec 7. Exp Neurol. 2025. PMID: 39647573 Free PMC article.
An infrastructure for qualified data sharing and team science in late-stage translational spinal cord injury research.
Huie JR, Torres-Espin A, Sacramento J, Keller AV, Joiner WM, North R, Reinkensmeyer DJ, Rosenzweig ES, Koffler J, Tuszynski MH, Sparrey CJ, Nielson JL, Beattie MS, Bresnahan JC, Grethe JS, Ferguson AR. Huie JR, et al. Among authors: grethe js. Exp Neurol. 2025 Jan;383:114995. doi: 10.1016/j.expneurol.2024.114995. Epub 2024 Oct 10. Exp Neurol. 2025. PMID: 39393672 Free article. Review.
63 results