Plotkin SS - Search Results

1

Understanding protein folding with energy landscape theory. Part I: Basic concepts.

Plotkin SS, Onuchic JN. Plotkin SS, et al. Q Rev Biophys. 2002 May;35(2):111-67. doi: 10.1017/s0033583502003761. Q Rev Biophys. 2002. PMID: 12197302 Review. No abstract available.

2

Investigation of routes and funnels in protein folding by free energy functional methods.

Plotkin SS, Onuchic JN. Plotkin SS, et al. Proc Natl Acad Sci U S A. 2000 Jun 6;97(12):6509-14. doi: 10.1073/pnas.97.12.6509. Proc Natl Acad Sci U S A. 2000. PMID: 10841554 Free PMC article.

3

Speeding protein folding beyond the G(o) model: how a little frustration sometimes helps.

Plotkin SS. Plotkin SS. Proteins. 2001 Dec 1;45(4):337-45. doi: 10.1002/prot.1154. Proteins. 2001. PMID: 11746681

4

Understanding protein folding with energy landscape theory. Part II: Quantitative aspects.

Plotkin SS, Onuchic JN. Plotkin SS, et al. Q Rev Biophys. 2002 Aug;35(3):205-86. doi: 10.1017/s0033583502003785. Q Rev Biophys. 2002. PMID: 12599750 Review. No abstract available.

5

Buffed energy landscapes: another solution to the kinetic paradoxes of protein folding.

Plotkin SS, Wolynes PG. Plotkin SS, et al. Proc Natl Acad Sci U S A. 2003 Apr 15;100(8):4417-22. doi: 10.1073/pnas.0330720100. Epub 2003 Apr 3. Proc Natl Acad Sci U S A. 2003. PMID: 12677002 Free PMC article.

6

Determination of barrier heights and prefactors from protein folding rate data.

Plotkin SS. Plotkin SS. Biophys J. 2005 Jun;88(6):3762-9. doi: 10.1529/biophysj.104.052548. Epub 2005 Mar 11. Biophys J. 2005. PMID: 15764665 Free PMC article.

7

The effects of nonnative interactions on protein folding rates: theory and simulation.

Clementi C, Plotkin SS. Clementi C, et al. Among authors: plotkin ss. Protein Sci. 2004 Jul;13(7):1750-66. doi: 10.1110/ps.03580104. Protein Sci. 2004. PMID: 15215519 Free PMC article.

8

Three-body interactions improve the prediction of rate and mechanism in protein folding models.

Ejtehadi MR, Avall SP, Plotkin SS. Ejtehadi MR, et al. Among authors: plotkin ss. Proc Natl Acad Sci U S A. 2004 Oct 19;101(42):15088-93. doi: 10.1073/pnas.0403486101. Epub 2004 Oct 6. Proc Natl Acad Sci U S A. 2004. PMID: 15469920 Free PMC article.

9

Generalization of distance to higher dimensional objects.

Plotkin SS. Plotkin SS. Proc Natl Acad Sci U S A. 2007 Sep 18;104(38):14899-904. doi: 10.1073/pnas.0607833104. Epub 2007 Sep 11. Proc Natl Acad Sci U S A. 2007. PMID: 17848528 Free PMC article.

10

Soft Vibrational Modes Predict Breaking Events during Force-Induced Protein Unfolding.

Habibi M, Plotkin SS, Rottler J. Habibi M, et al. Among authors: plotkin ss. Biophys J. 2018 Feb 6;114(3):562-569. doi: 10.1016/j.bpj.2017.11.3781. Biophys J. 2018. PMID: 29414701 Free PMC article.

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