Liu JS - Search Results

1

BioOptimizer: a Bayesian scoring function approach to motif discovery.

Jensen ST, Liu JS. Jensen ST, et al. Among authors: liu js. Bioinformatics. 2004 Jul 10;20(10):1557-64. doi: 10.1093/bioinformatics/bth127. Epub 2004 Feb 12. Bioinformatics. 2004. PMID: 14962923

2

Bayesian adaptive sequence alignment algorithms.

Zhu J, Liu JS, Lawrence CE. Zhu J, et al. Among authors: liu js. Bioinformatics. 1998;14(1):25-39. doi: 10.1093/bioinformatics/14.1.25. Bioinformatics. 1998. PMID: 9520499

3

Bayesian inference on biopolymer models.

Liu JS, Lawrence CE. Liu JS, et al. Bioinformatics. 1999 Jan;15(1):38-52. doi: 10.1093/bioinformatics/15.1.38. Bioinformatics. 1999. PMID: 10068691

4

Identification of co-regulated genes through Bayesian clustering of predicted regulatory binding sites.

Qin ZS, McCue LA, Thompson W, Mayerhofer L, Lawrence CE, Liu JS. Qin ZS, et al. Among authors: liu js. Nat Biotechnol. 2003 Apr;21(4):435-9. doi: 10.1038/nbt802. Epub 2003 Mar 10. Nat Biotechnol. 2003. PMID: 12627170

5

The sigmaE regulon and the identification of additional sporulation genes in Bacillus subtilis.

Eichenberger P, Jensen ST, Conlon EM, van Ooij C, Silvaggi J, González-Pastor JE, Fujita M, Ben-Yehuda S, Stragier P, Liu JS, Losick R. Eichenberger P, et al. Among authors: liu js. J Mol Biol. 2003 Apr 11;327(5):945-72. doi: 10.1016/s0022-2836(03)00205-5. J Mol Biol. 2003. PMID: 12662922

6

The Spo0A regulon of Bacillus subtilis.

Molle V, Fujita M, Jensen ST, Eichenberger P, González-Pastor JE, Liu JS, Losick R. Molle V, et al. Among authors: liu js. Mol Microbiol. 2003 Dec;50(5):1683-701. doi: 10.1046/j.1365-2958.2003.03818.x. Mol Microbiol. 2003. PMID: 14651647 Free article.

7

Statistical resynchronization and Bayesian detection of periodically expressed genes.

Lu X, Zhang W, Qin ZS, Kwast KE, Liu JS. Lu X, et al. Among authors: liu js. Nucleic Acids Res. 2004 Jan 22;32(2):447-55. doi: 10.1093/nar/gkh205. Print 2004. Nucleic Acids Res. 2004. PMID: 14739237 Free PMC article.

8

Modeling within-motif dependence for transcription factor binding site predictions.

Zhou Q, Liu JS. Zhou Q, et al. Among authors: liu js. Bioinformatics. 2004 Apr 12;20(6):909-16. doi: 10.1093/bioinformatics/bth006. Epub 2004 Jan 29. Bioinformatics. 2004. PMID: 14751969

9

The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.

Eichenberger P, Fujita M, Jensen ST, Conlon EM, Rudner DZ, Wang ST, Ferguson C, Haga K, Sato T, Liu JS, Losick R. Eichenberger P, et al. Among authors: liu js. PLoS Biol. 2004 Oct;2(10):e328. doi: 10.1371/journal.pbio.0020328. Epub 2004 Sep 21. PLoS Biol. 2004. PMID: 15383836 Free PMC article.

10

BEST: binding-site estimation suite of tools.

Che D, Jensen S, Cai L, Liu JS. Che D, et al. Among authors: liu js. Bioinformatics. 2005 Jun 15;21(12):2909-11. doi: 10.1093/bioinformatics/bti425. Epub 2005 Apr 6. Bioinformatics. 2005. PMID: 15814553

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