Liu JS - Search Results

1

Defining a centromere-like element in Bacillus subtilis by Identifying the binding sites for the chromosome-anchoring protein RacA.

Ben-Yehuda S, Fujita M, Liu XS, Gorbatyuk B, Skoko D, Yan J, Marko JF, Liu JS, Eichenberger P, Rudner DZ, Losick R. Ben-Yehuda S, et al. Among authors: liu js, liu xs. Mol Cell. 2005 Mar 18;17(6):773-82. doi: 10.1016/j.molcel.2005.02.023. Mol Cell. 2005. PMID: 15780934 Free article.

2

An algorithm for finding protein-DNA binding sites with applications to chromatin-immunoprecipitation microarray experiments.

Liu XS, Brutlag DL, Liu JS. Liu XS, et al. Among authors: liu js. Nat Biotechnol. 2002 Aug;20(8):835-9. doi: 10.1038/nbt717. Epub 2002 Jul 8. Nat Biotechnol. 2002. PMID: 12101404

3

Integrating regulatory motif discovery and genome-wide expression analysis.

Conlon EM, Liu XS, Lieb JD, Liu JS. Conlon EM, et al. Among authors: liu js, liu xs. Proc Natl Acad Sci U S A. 2003 Mar 18;100(6):3339-44. doi: 10.1073/pnas.0630591100. Epub 2003 Mar 7. Proc Natl Acad Sci U S A. 2003. PMID: 12626739 Free PMC article.

4

The sigmaE regulon and the identification of additional sporulation genes in Bacillus subtilis.

Eichenberger P, Jensen ST, Conlon EM, van Ooij C, Silvaggi J, González-Pastor JE, Fujita M, Ben-Yehuda S, Stragier P, Liu JS, Losick R. Eichenberger P, et al. Among authors: liu js. J Mol Biol. 2003 Apr 11;327(5):945-72. doi: 10.1016/s0022-2836(03)00205-5. J Mol Biol. 2003. PMID: 12662922

5

The Spo0A regulon of Bacillus subtilis.

Molle V, Fujita M, Jensen ST, Eichenberger P, González-Pastor JE, Liu JS, Losick R. Molle V, et al. Among authors: liu js. Mol Microbiol. 2003 Dec;50(5):1683-701. doi: 10.1046/j.1365-2958.2003.03818.x. Mol Microbiol. 2003. PMID: 14651647 Free article.

6

The program of gene transcription for a single differentiating cell type during sporulation in Bacillus subtilis.

Eichenberger P, Fujita M, Jensen ST, Conlon EM, Rudner DZ, Wang ST, Ferguson C, Haga K, Sato T, Liu JS, Losick R. Eichenberger P, et al. Among authors: liu js. PLoS Biol. 2004 Oct;2(10):e328. doi: 10.1371/journal.pbio.0020328. Epub 2004 Sep 21. PLoS Biol. 2004. PMID: 15383836 Free PMC article.

7

A boosting approach for motif modeling using ChIP-chip data.

Hong P, Liu XS, Zhou Q, Lu X, Liu JS, Wong WH. Hong P, et al. Among authors: liu js, liu xs. Bioinformatics. 2005 Jun 1;21(11):2636-43. doi: 10.1093/bioinformatics/bti402. Epub 2005 Apr 7. Bioinformatics. 2005. PMID: 15817698

8

Broadly heterogeneous activation of the master regulator for sporulation in Bacillus subtilis.

Chastanet A, Vitkup D, Yuan GC, Norman TM, Liu JS, Losick RM. Chastanet A, et al. Among authors: liu js. Proc Natl Acad Sci U S A. 2010 May 4;107(18):8486-91. doi: 10.1073/pnas.1002499107. Epub 2010 Apr 19. Proc Natl Acad Sci U S A. 2010. PMID: 20404177 Free PMC article.

9

MM-ChIP enables integrative analysis of cross-platform and between-laboratory ChIP-chip or ChIP-seq data.

Chen Y, Meyer CA, Liu T, Li W, Liu JS, Liu XS. Chen Y, et al. Among authors: liu js, liu xs, liu t. Genome Biol. 2011;12(2):R11. doi: 10.1186/gb-2011-12-2-r11. Epub 2011 Feb 1. Genome Biol. 2011. PMID: 21284836 Free PMC article.

10

Inference of transcriptional regulation in cancers.

Jiang P, Freedman ML, Liu JS, Liu XS. Jiang P, et al. Among authors: liu js, liu xs. Proc Natl Acad Sci U S A. 2015 Jun 23;112(25):7731-6. doi: 10.1073/pnas.1424272112. Epub 2015 Jun 8. Proc Natl Acad Sci U S A. 2015. PMID: 26056275 Free PMC article.

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