Edwards JS - Search Results

1

Spatial modeling of dimerization reaction dynamics in the plasma membrane: Monte Carlo vs. continuum differential equations.

Mayawala K, Vlachos DG, Edwards JS. Mayawala K, et al. Among authors: edwards js. Biophys Chem. 2006 Jun 1;121(3):194-208. doi: 10.1016/j.bpc.2006.01.008. Epub 2006 Feb 28. Biophys Chem. 2006. PMID: 16504372

2

Microscopic simulation of membrane molecule diffusion on corralled membrane surfaces.

Niehaus AM, Vlachos DG, Edwards JS, Plechac P, Tribe R. Niehaus AM, et al. Among authors: edwards js. Biophys J. 2008 Mar 1;94(5):1551-64. doi: 10.1529/biophysj.107.106484. Epub 2007 Nov 9. Biophys J. 2008. PMID: 17993499 Free PMC article.

3

Coupled stochastic spatial and non-spatial simulations of ErbB1 signaling pathways demonstrate the importance of spatial organization in signal transduction.

Costa MN, Radhakrishnan K, Wilson BS, Vlachos DG, Edwards JS. Costa MN, et al. Among authors: edwards js. PLoS One. 2009 Jul 23;4(7):e6316. doi: 10.1371/journal.pone.0006316. PLoS One. 2009. PMID: 19626123 Free PMC article.

4

MAPK cascade possesses decoupled controllability of signal amplification and duration.

Mayawala K, Gelmi CA, Edwards JS. Mayawala K, et al. Among authors: edwards js. Biophys J. 2004 Nov;87(5):L01-2. doi: 10.1529/biophysj.104.051888. Epub 2004 Sep 28. Biophys J. 2004. PMID: 15454405 Free PMC article.

5

Time accelerated Monte Carlo simulations of biological networks using the binomial tau-leap method.

Chatterjee A, Mayawala K, Edwards JS, Vlachos DG. Chatterjee A, et al. Among authors: edwards js. Bioinformatics. 2005 May 1;21(9):2136-7. doi: 10.1093/bioinformatics/bti308. Epub 2005 Feb 4. Bioinformatics. 2005. PMID: 15699024

6

Heterogeneities in EGF receptor density at the cell surface can lead to concave up scatchard plot of EGF binding.

Mayawala K, Vlachos DG, Edwards JS. Mayawala K, et al. Among authors: edwards js. FEBS Lett. 2005 Jun 6;579(14):3043-7. doi: 10.1016/j.febslet.2005.04.059. FEBS Lett. 2005. PMID: 15896781 Free article.

7

Computational modeling reveals molecular details of epidermal growth factor binding.

Mayawala K, Vlachos DG, Edwards JS. Mayawala K, et al. Among authors: edwards js. BMC Cell Biol. 2005 Nov 30;6:41. doi: 10.1186/1471-2121-6-41. BMC Cell Biol. 2005. PMID: 16318625 Free PMC article.

8

Dynamic transition states of ErbB1 phosphorylation predicted by spatial stochastic modeling.

Pryor MM, Low-Nam ST, Halász AM, Lidke DS, Wilson BS, Edwards JS. Pryor MM, et al. Among authors: edwards js. Biophys J. 2013 Sep 17;105(6):1533-43. doi: 10.1016/j.bpj.2013.07.056. Biophys J. 2013. PMID: 24048005 Free PMC article.

9

Description and analysis of metabolic connectivity and dynamics in the human red blood cell.

Kauffman KJ, Pajerowski JD, Jamshidi N, Palsson BO, Edwards JS. Kauffman KJ, et al. Among authors: edwards js. Biophys J. 2002 Aug;83(2):646-62. doi: 10.1016/S0006-3495(02)75198-9. Biophys J. 2002. PMID: 12124254 Free PMC article.

10

Monte Carlo simulations of plasma membrane corral-induced EGFR clustering.

Costa MN, Radhakrishnan K, Edwards JS. Costa MN, et al. Among authors: edwards js. J Biotechnol. 2011 Feb 10;151(3):261-70. doi: 10.1016/j.jbiotec.2010.12.009. Epub 2010 Dec 15. J Biotechnol. 2011. PMID: 21167222 Free PMC article.

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