Numata T - Search Results

1

A fifth protein subunit Ph1496p elevates the optimum temperature for the ribonuclease P activity from Pyrococcus horikoshii OT3.

Fukuhara H, Kifusa M, Watanabe M, Terada A, Honda T, Numata T, Kakuta Y, Kimura M. Fukuhara H, et al. Among authors: numata t. Biochem Biophys Res Commun. 2006 May 12;343(3):956-64. doi: 10.1016/j.bbrc.2006.02.192. Epub 2006 Mar 15. Biochem Biophys Res Commun. 2006. PMID: 16574071

2

Expression and mutational analysis of amino acid residues involved in catalytic activity in a ribonuclease MC1 from the seeds of bitter gourd.

Numata T, Kashiba T, Hino M, Funatsu G, Ishiguro M, Yamasaki N, Kimura M. Numata T, et al. Biosci Biotechnol Biochem. 2000 Mar;64(3):603-5. doi: 10.1271/bbb.64.603. Biosci Biotechnol Biochem. 2000. PMID: 10803962 Free article.

3

Crystal structures of the ribonuclease MC1 from bitter gourd seeds, complexed with 2'-UMP or 3'-UMP, reveal structural basis for uridine specificity.

Suzuki A, Yao M, Tanaka I, Numata T, Kikukawa S, Yamasaki N, Kimura M. Suzuki A, et al. Among authors: numata t. Biochem Biophys Res Commun. 2000 Aug 28;275(2):572-6. doi: 10.1006/bbrc.2000.3318. Biochem Biophys Res Commun. 2000. PMID: 10964705

4

Amino acid residues in ribonuclease MC1 from bitter gourd seeds which are essential for uridine specificity.

Numata T, Suzuki A, Yao M, Tanaka I, Kimura M. Numata T, et al. Biochemistry. 2001 Jan 16;40(2):524-30. doi: 10.1021/bi002096f. Biochemistry. 2001. PMID: 11148047

5

Contribution of Gln9 and Phe80 to substrate binding in ribonuclease MC1 from bitter gourd seeds.

Numata T, Kimura M. Numata T, et al. J Biochem. 2001 Nov;130(5):621-6. doi: 10.1093/oxfordjournals.jbchem.a003027. J Biochem. 2001. PMID: 11686924 Free article.

6

Crystal structures of the ribonuclease MC1 mutants N71T and N71S in complex with 5'-GMP: structural basis for alterations in substrate specificity.

Numata T, Suzuki A, Kakuta Y, Kimura K, Yao M, Tanaka I, Yoshida Y, Ueda T, Kimura M. Numata T, et al. Biochemistry. 2003 May 13;42(18):5270-8. doi: 10.1021/bi034103g. Biochemistry. 2003. PMID: 12731868

Mutations of Asn71 in RNase MC1 to the amino acids Thr (N71T) and Ser (N71S) in guanosine preferential RNases altered the substrate specificity from uridine specific to guanosine specific, as shown by the transphosphorylation of diribonucleoside monophosphates [Numata, …

Mutations of Asn71 in RNase MC1 to the amino acids Thr (N71T) and Ser (N71S) in guanosine preferential RNases altered the substrate specific …

7

Reconstitution of archaeal ribonuclease P from RNA and four protein components.

Kouzuma Y, Mizoguchi M, Takagi H, Fukuhara H, Tsukamoto M, Numata T, Kimura M. Kouzuma Y, et al. Among authors: numata t. Biochem Biophys Res Commun. 2003 Jul 4;306(3):666-73. doi: 10.1016/s0006-291x(03)01034-9. Biochem Biophys Res Commun. 2003. PMID: 12810070

8

Crystal structure of the ribonuclease P protein Ph1877p from hyperthermophilic archaeon Pyrococcus horikoshii OT3.

Takagi H, Watanabe M, Kakuta Y, Kamachi R, Numata T, Tanaka I, Kimura M. Takagi H, et al. Among authors: numata t. Biochem Biophys Res Commun. 2004 Jul 2;319(3):787-94. doi: 10.1016/j.bbrc.2004.05.055. Biochem Biophys Res Commun. 2004. PMID: 15184052

9

Crystal structure of archaeal ribonuclease P protein Ph1771p from Pyrococcus horikoshii OT3: an archaeal homolog of eukaryotic ribonuclease P protein Rpp29.

Numata T, Ishimatsu I, Kakuta Y, Tanaka I, Kimura M. Numata T, et al. RNA. 2004 Sep;10(9):1423-32. doi: 10.1261/rna.7560904. RNA. 2004. PMID: 15317976 Free PMC article.

10

Amino acids conserved at the C-terminal half of the ribonuclease T2 family contribute to protein stability of the enzymes.

Kimura K, Numata T, Kakuta Y, Kimura M. Kimura K, et al. Among authors: numata t. Biosci Biotechnol Biochem. 2004 Aug;68(8):1748-57. doi: 10.1271/bbb.68.1748. Biosci Biotechnol Biochem. 2004. PMID: 15322360 Free article.

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