Pybus OG - Search Results

1

Taming the BEAST-A Community Teaching Material Resource for BEAST 2.

Barido-Sottani J, Bošková V, Plessis LD, Kühnert D, Magnus C, Mitov V, Müller NF, PecErska J, Rasmussen DA, Zhang C, Drummond AJ, Heath TA, Pybus OG, Vaughan TG, Stadler T. Barido-Sottani J, et al. Among authors: pybus og. Syst Biol. 2018 Jan 1;67(1):170-174. doi: 10.1093/sysbio/syx060. Syst Biol. 2018. PMID: 28673048 Free PMC article.

2

New inferences from tree shape: numbers of missing taxa and population growth rates.

Pybus OG, Rambaut A, Holmes EC, Harvey PH. Pybus OG, et al. Syst Biol. 2002 Dec;51(6):881-8. doi: 10.1080/10635150290102582. Syst Biol. 2002. PMID: 12554454

3

The epidemiology and iatrogenic transmission of hepatitis C virus in Egypt: a Bayesian coalescent approach.

Pybus OG, Drummond AJ, Nakano T, Robertson BH, Rambaut A. Pybus OG, et al. Mol Biol Evol. 2003 Mar;20(3):381-7. doi: 10.1093/molbev/msg043. Mol Biol Evol. 2003. PMID: 12644558

4

Inference of viral evolutionary rates from molecular sequences.

Drummond A, Pybus OG, Rambaut A. Drummond A, et al. Among authors: pybus og. Adv Parasitol. 2003;54:331-58. doi: 10.1016/s0065-308x(03)54008-8. Adv Parasitol. 2003. PMID: 14711090 Review.

5

Rise and fall of the Beringian steppe bison.

Shapiro B, Drummond AJ, Rambaut A, Wilson MC, Matheus PE, Sher AV, Pybus OG, Gilbert MT, Barnes I, Binladen J, Willerslev E, Hansen AJ, Baryshnikov GF, Burns JA, Davydov S, Driver JC, Froese DG, Harington CR, Keddie G, Kosintsev P, Kunz ML, Martin LD, Stephenson RO, Storer J, Tedford R, Zimov S, Cooper A. Shapiro B, et al. Among authors: pybus og. Science. 2004 Nov 26;306(5701):1561-5. doi: 10.1126/science.1101074. Science. 2004. PMID: 15567864

6

Bayesian coalescent inference of past population dynamics from molecular sequences.

Drummond AJ, Rambaut A, Shapiro B, Pybus OG. Drummond AJ, et al. Among authors: pybus og. Mol Biol Evol. 2005 May;22(5):1185-92. doi: 10.1093/molbev/msi103. Epub 2005 Feb 9. Mol Biol Evol. 2005. PMID: 15703244

7

Phylogenetic evidence for deleterious mutation load in RNA viruses and its contribution to viral evolution.

Pybus OG, Rambaut A, Belshaw R, Freckleton RP, Drummond AJ, Holmes EC. Pybus OG, et al. Mol Biol Evol. 2007 Mar;24(3):845-52. doi: 10.1093/molbev/msm001. Epub 2007 Jan 11. Mol Biol Evol. 2007. PMID: 17218639

8

Synonymous substitution rates predict HIV disease progression as a result of underlying replication dynamics.

Lemey P, Kosakovsky Pond SL, Drummond AJ, Pybus OG, Shapiro B, Barroso H, Taveira N, Rambaut A. Lemey P, et al. Among authors: pybus og. PLoS Comput Biol. 2007 Feb 16;3(2):e29. doi: 10.1371/journal.pcbi.0030029. Epub 2007 Jan 2. PLoS Comput Biol. 2007. PMID: 17305421 Free PMC article.

9

A Bayesian phylogenetic method to estimate unknown sequence ages.

Shapiro B, Ho SY, Drummond AJ, Suchard MA, Pybus OG, Rambaut A. Shapiro B, et al. Among authors: pybus og. Mol Biol Evol. 2011 Feb;28(2):879-87. doi: 10.1093/molbev/msq262. Epub 2010 Oct 1. Mol Biol Evol. 2011. PMID: 20889726 Free PMC article.

10

Exact Bayesian inference for phylogenetic birth-death models.

Parag KV, Pybus OG. Parag KV, et al. Among authors: pybus og. Bioinformatics. 2018 Nov 1;34(21):3638-3645. doi: 10.1093/bioinformatics/bty337. Bioinformatics. 2018. PMID: 29718104

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