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Analyzing high-dimensional cytometry data using FlowSOM.
Nat Protoc. 2021 Aug;16(8):3775-3801. doi: 10.1038/s41596-021-00550-0. Epub 2021 Jun 25.
Nat Protoc. 2021.
PMID: 34172973
Review.
Challenges in translational machine learning.
Couckuyt A, Seurinck R, Emmaneel A, Quintelier K, Novak D, Van Gassen S, Saeys Y.
Couckuyt A, et al.
Hum Genet. 2022 Sep;141(9):1451-1466. doi: 10.1007/s00439-022-02439-8. Epub 2022 Mar 4.
Hum Genet. 2022.
PMID: 35246744
Free PMC article.
Review.
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Unraveling genotype-phenotype associations and predictive modeling of outcome in acute myeloid leukemia.
Couckuyt A, Van Gassen S, Emmaneel A, Janda V, Buysse M, Moors I, Philippé J, Hofmans M, Kerre T, Saeys Y, Bonte S.
Couckuyt A, et al.
Cytometry B Clin Cytom. 2025 Mar 20. doi: 10.1002/cyto.b.22230. Online ahead of print.
Cytometry B Clin Cytom. 2025.
PMID: 40110766
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Efficient cytometry analysis with FlowSOM in Python boosts interoperability with other single-cell tools.
Couckuyt A, Rombaut B, Saeys Y, Van Gassen S.
Couckuyt A, et al.
Bioinformatics. 2024 Mar 29;40(4):btae179. doi: 10.1093/bioinformatics/btae179.
Bioinformatics. 2024.
PMID: 38632080
Free PMC article.
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