David SS - Search Results

1

Structural snapshots of base excision by the cancer-associated variant MutY N146S reveal a retaining mechanism.

Demir M, Russelburg LP, Lin WJ, Trasviña-Arenas CH, Huang B, Yuen PK, Horvath MP, David SS. Demir M, et al. Among authors: david ss. Nucleic Acids Res. 2023 Feb 22;51(3):1034-1049. doi: 10.1093/nar/gkac1246. Nucleic Acids Res. 2023. PMID: 36631987 Free PMC article.

2

Evidence that MutY is a monofunctional glycosylase capable of forming a covalent Schiff base intermediate with substrate DNA.

Williams SD, David SS. Williams SD, et al. Among authors: david ss. Nucleic Acids Res. 1998 Nov 15;26(22):5123-33. doi: 10.1093/nar/26.22.5123. Nucleic Acids Res. 1998. PMID: 9801309 Free PMC article.

3

Substrate recognition by Escherichia coli MutY using substrate analogs.

Chepanoske CL, Porello SL, Fujiwara T, Sugiyama H, David SS. Chepanoske CL, et al. Among authors: david ss. Nucleic Acids Res. 1999 Aug 1;27(15):3197-204. doi: 10.1093/nar/27.15.3197. Nucleic Acids Res. 1999. PMID: 10454618 Free PMC article.

4

Efficient recognition of substrates and substrate analogs by the adenine glycosylase MutY requires the C-terminal domain.

Chmiel NH, Golinelli MP, Francis AW, David SS. Chmiel NH, et al. Among authors: david ss. Nucleic Acids Res. 2001 Jan 15;29(2):553-64. doi: 10.1093/nar/29.2.553. Nucleic Acids Res. 2001. PMID: 11139626 Free PMC article.

5

The DNA glycosylase AlkD uses a non-base-flipping mechanism to excise bulky lesions.

Mullins EA, Shi R, Parsons ZD, Yuen PK, David SS, Igarashi Y, Eichman BF. Mullins EA, et al. Among authors: david ss. Nature. 2015 Nov 12;527(7577):254-8. doi: 10.1038/nature15728. Epub 2015 Oct 28. Nature. 2015. PMID: 26524531 Free PMC article.

6

Structure and stereochemistry of the base excision repair glycosylase MutY reveal a mechanism similar to retaining glycosidases.

Woods RD, O'Shea VL, Chu A, Cao S, Richards JL, Horvath MP, David SS. Woods RD, et al. Among authors: david ss. Nucleic Acids Res. 2016 Jan 29;44(2):801-10. doi: 10.1093/nar/gkv1469. Epub 2015 Dec 15. Nucleic Acids Res. 2016. PMID: 26673696 Free PMC article.

7

Selective base excision repair of DNA damage by the non-base-flipping DNA glycosylase AlkC.

Shi R, Mullins EA, Shen XX, Lay KT, Yuen PK, David SS, Rokas A, Eichman BF. Shi R, et al. Among authors: david ss. EMBO J. 2018 Jan 4;37(1):63-74. doi: 10.15252/embj.201797833. Epub 2017 Oct 20. EMBO J. 2018. PMID: 29054852 Free PMC article.

8

Targeting Base Excision Repair Glycosylases with DNA Containing Transition State Mimics Prepared via Click Chemistry.

Yuen PK, Green SA, Ashby J, Lay KT, Santra A, Chen X, Horvath MP, David SS. Yuen PK, et al. Among authors: david ss. ACS Chem Biol. 2019 Jan 18;14(1):27-36. doi: 10.1021/acschembio.8b00771. Epub 2019 Jan 2. ACS Chem Biol. 2019. PMID: 30500207 Free PMC article.

9

Evolution of Base Excision Repair in Entamoeba histolytica is shaped by gene loss, gene duplication, and lateral gene transfer.

Trasviña-Arenas CH, David SS, Delaye L, Azuara-Liceaga E, Brieba LG. Trasviña-Arenas CH, et al. Among authors: david ss. DNA Repair (Amst). 2019 Apr;76:76-88. doi: 10.1016/j.dnarep.2019.02.009. Epub 2019 Feb 22. DNA Repair (Amst). 2019. PMID: 30822689

10

Structural Basis for Finding OG Lesions and Avoiding Undamaged G by the DNA Glycosylase MutY.

Russelburg LP, O'Shea Murray VL, Demir M, Knutsen KR, Sehgal SL, Cao S, David SS, Horvath MP. Russelburg LP, et al. Among authors: david ss. ACS Chem Biol. 2020 Jan 17;15(1):93-102. doi: 10.1021/acschembio.9b00639. Epub 2019 Dec 27. ACS Chem Biol. 2020. PMID: 31829624 Free PMC article.

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