van Leeuwen F - Search Results

1

Dynamic epistasis analysis reveals how chromatin remodeling regulates transcriptional bursting.

Brouwer I, Kerklingh E, van Leeuwen F, Lenstra TL. Brouwer I, et al. Among authors: van leeuwen f. Nat Struct Mol Biol. 2023 May;30(5):692-702. doi: 10.1038/s41594-023-00981-1. Epub 2023 May 1. Nat Struct Mol Biol. 2023. PMID: 37127821 Free PMC article.

2

Dot1 binding induces chromatin rearrangements by histone methylation-dependent and -independent mechanisms.

Stulemeijer IJ, Pike BL, Faber AW, Verzijlbergen KF, van Welsem T, Frederiks F, Lenstra TL, Holstege FC, Gasser SM, van Leeuwen F. Stulemeijer IJ, et al. Among authors: van leeuwen f, van welsem t. Epigenetics Chromatin. 2011 Feb 3;4(1):2. doi: 10.1186/1756-8935-4-2. Epigenetics Chromatin. 2011. PMID: 21291527 Free PMC article.

3

A barcode screen for epigenetic regulators reveals a role for the NuB4/HAT-B histone acetyltransferase complex in histone turnover.

Verzijlbergen KF, van Welsem T, Sie D, Lenstra TL, Turner DJ, Holstege FC, Kerkhoven RM, van Leeuwen F. Verzijlbergen KF, et al. Among authors: van leeuwen f, van welsem t. PLoS Genet. 2011 Oct;7(10):e1002284. doi: 10.1371/journal.pgen.1002284. Epub 2011 Oct 6. PLoS Genet. 2011. PMID: 21998594 Free PMC article.

4

Dot1 promotes H2B ubiquitination by a methyltransferase-independent mechanism.

van Welsem T, Korthout T, Ekkebus R, Morais D, Molenaar TM, van Harten K, Poramba-Liyanage DW, Sun SM, Lenstra TL, Srivas R, Ideker T, Holstege FCP, van Attikum H, El Oualid F, Ovaa H, Stulemeijer IJE, Vlaming H, van Leeuwen F. van Welsem T, et al. Among authors: van leeuwen f, van harten k, van attikum h. Nucleic Acids Res. 2018 Nov 30;46(21):11251-11261. doi: 10.1093/nar/gky801. Nucleic Acids Res. 2018. PMID: 30203048 Free PMC article.

5

Nonprocessive methylation by Dot1 leads to functional redundancy of histone H3K79 methylation states.

Frederiks F, Tzouros M, Oudgenoeg G, van Welsem T, Fornerod M, Krijgsveld J, van Leeuwen F. Frederiks F, et al. Among authors: van leeuwen f, van welsem t. Nat Struct Mol Biol. 2008 Jun;15(6):550-7. doi: 10.1038/nsmb.1432. Epub 2008 May 30. Nat Struct Mol Biol. 2008. PMID: 18511943

6

A network model of the molecular organization of chromatin in Drosophila.

van Bemmel JG, Filion GJ, Rosado A, Talhout W, de Haas M, van Welsem T, van Leeuwen F, van Steensel B. van Bemmel JG, et al. Among authors: van leeuwen f, van welsem t, van steensel b. Mol Cell. 2013 Feb 21;49(4):759-71. doi: 10.1016/j.molcel.2013.01.040. Mol Cell. 2013. PMID: 23438860 Free article.

7

Epi-ID: Systematic and Direct Screening for Chromatin Regulators in Yeast by Barcode-ChIP-Seq.

Poramba-Liyanage DW, Korthout T, van Leeuwen F. Poramba-Liyanage DW, et al. Among authors: van leeuwen f. Methods Mol Biol. 2019;2049:87-103. doi: 10.1007/978-1-4939-9736-7_5. Methods Mol Biol. 2019. PMID: 31602606

8

Epi-Decoder: Decoding the Local Proteome of a Genomic Locus by Massive Parallel Chromatin Immunoprecipitation Combined with DNA-Barcode Sequencing.

van Breugel ME, van Leeuwen F. van Breugel ME, et al. Among authors: van leeuwen f. Methods Mol Biol. 2022;2458:123-150. doi: 10.1007/978-1-0716-2140-0_8. Methods Mol Biol. 2022. PMID: 35103966

9

The choreography of chromatin in RNA polymerase III regulation.

van Breugel ME, Gerber A, van Leeuwen F. van Breugel ME, et al. Among authors: van leeuwen f. Biochem Soc Trans. 2024 Jun 26;52(3):1173-1189. doi: 10.1042/BST20230770. Biochem Soc Trans. 2024. PMID: 38666598 Free PMC article. Review.

10

Synthetic lethal screens identify gene silencing processes in yeast and implicate the acetylated amino terminus of Sir3 in recognition of the nucleosome core.

van Welsem T, Frederiks F, Verzijlbergen KF, Faber AW, Nelson ZW, Egan DA, Gottschling DE, van Leeuwen F. van Welsem T, et al. Among authors: van leeuwen f. Mol Cell Biol. 2008 Jun;28(11):3861-72. doi: 10.1128/MCB.02050-07. Epub 2008 Apr 7. Mol Cell Biol. 2008. PMID: 18391024 Free PMC article.

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