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Page 1
Global Evaluation of Congenital Heart Disease-Associated Non-Coding Variants.
Peña-Martínez EG, Sharma S, Medina-Feliciano JG, Root E, Parks LG, Granitto M, Pomales-Matos DA, Messon-Bird JL, Barreiro-Rosario AC, Sanabria-Alberto L, Rivera-Madera A, Rodríguez-Ríos JM, Velázquez-Roig R, Figueroa-Rosado JA, Noon M, Donmez OA, Forney C, Hesse HK, Dunn KA, Chen X, Hass MR, Lawson LP, Weirauch MT, Kottyan LC, Reilly SK, Bhimsaria D, Rodríguez-Martínez JA. Peña-Martínez EG, et al. Among authors: rodriguez rios jm. Res Sq [Preprint]. 2026 Jan 7:rs.3.rs-8429365. doi: 10.21203/rs.3.rs-8429365/v1. Res Sq. 2026. PMID: 41542063 Free PMC article. Preprint.
Protocol for evaluating the impact of non-coding variants on transcription factor binding and gene expression.
Peña-Martínez EG, Rodríguez-Ríos JM, Messon-Bird JL, Barreiro-Rosario AC, Velázquez-Roig R, Rivera-Madera A, Peterson-Peguero EA, Rodríguez-Martínez JA. Peña-Martínez EG, et al. Among authors: rodriguez rios jm. STAR Protoc. 2025 Jun 20;6(2):103874. doi: 10.1016/j.xpro.2025.103874. Epub 2025 Jun 4. STAR Protoc. 2025. PMID: 40478739 Free PMC article.
Cardiovascular disease-associated non-coding variants disrupt GATA4-DNA binding and regulatory functions.
Peña-Martínez EG, Messon-Bird JL, Rodríguez-Ríos JM, Velázquez-Roig R, Pomales-Matos DA, Rivera-Madera A, Sanabria-Alberto L, Barreiro-Rosario AC, Figueroa-Rosado JA, Rivera-Del Valle J, Muñoz-Páez NE, Peterson-Peguero EA, Rodríguez-Martínez JA. Peña-Martínez EG, et al. Among authors: rodriguez rios jm. HGG Adv. 2025 Apr 10;6(2):100415. doi: 10.1016/j.xhgg.2025.100415. Epub 2025 Feb 12. HGG Adv. 2025. PMID: 39943688 Free PMC article.
Prioritizing cardiovascular disease-associated variants altering NKX2-5 and TBX5 binding through an integrative computational approach.
Peña-Martínez EG, Pomales-Matos DA, Rivera-Madera A, Messon-Bird JL, Medina-Feliciano JG, Sanabria-Alberto L, Barreiro-Rosario AC, Rivera-Del Valle J, Rodríguez-Ríos JM, Rodríguez-Martínez JA. Peña-Martínez EG, et al. Among authors: rodriguez rios jm. J Biol Chem. 2023 Dec;299(12):105423. doi: 10.1016/j.jbc.2023.105423. Epub 2023 Nov 4. J Biol Chem. 2023. PMID: 37926287 Free PMC article.
Prioritizing Cardiovascular Disease-Associated Variants Altering NKX2-5 Binding through an Integrative Computational Approach.
Peña-Martínez EG, Pomales-Matos DA, Rivera-Madera A, Messon-Bird JL, Medina-Feliciano JG, Sanabria-Alberto L, Barreiro-Rosario AC, Rodriguez-Rios JM, Rodríguez-Martínez JA. Peña-Martínez EG, et al. Among authors: rodriguez rios jm. medRxiv [Preprint]. 2023 Sep 2:2023.09.01.23294951. doi: 10.1101/2023.09.01.23294951. medRxiv. 2023. Update in: J Biol Chem. 2023 Dec;299(12):105423. doi: 10.1016/j.jbc.2023.105423. PMID: 37693486 Free PMC article. Updated. Preprint.
Disease-associated non-coding variants alter NKX2-5 DNA-binding affinity.
Peña-Martínez EG, Rivera-Madera A, Pomales-Matos DA, Sanabria-Alberto L, Rosario-Cañuelas BM, Rodríguez-Ríos JM, Carrasquillo-Dones EA, Rodríguez-Martínez JA. Peña-Martínez EG, et al. Among authors: rodriguez rios jm. Biochim Biophys Acta Gene Regul Mech. 2023 Mar;1866(1):194906. doi: 10.1016/j.bbagrm.2023.194906. Epub 2023 Jan 21. Biochim Biophys Acta Gene Regul Mech. 2023. PMID: 36690178 Free PMC article.