Andrake M - Search Results

1

PALB2 and 53BP1 govern post-resection homologous recombination DNA repair.

Wang Y, Coulombe Y, Yueh WT, Conway GD, Milano L, Glass DJ, Thomas M, Rodrigue A, Nacson J, Lu D, Bernhardy AJ, Betsch RG, Russo AI, Elfar GA, Cai KQ, Testa JR, Andrake M, Dunbrack R, Gupta GP, Xia B, Dray E, Masson JY, Johnson N. Wang Y, et al. Among authors: andrake m. Mol Cell. 2025 Aug 7;85(15):2824-2838.e8. doi: 10.1016/j.molcel.2025.07.003. Epub 2025 Jul 31. Mol Cell. 2025. PMID: 40749686

2

Numb independently antagonizes Sanpodo membrane targeting and Notch signaling in Drosophila sensory organ precursor cells.

Tong X, Zitserman D, Serebriiskii I, Andrake M, Dunbrack R, Roegiers F. Tong X, et al. Mol Biol Cell. 2010 Mar 1;21(5):802-10. doi: 10.1091/mbc.e09-09-0831. Epub 2010 Jan 6. Mol Biol Cell. 2010. PMID: 20053677 Free PMC article.

3

A bifunctional regulatory element in human somatic Wee1 mediates cyclin A/Cdk2 binding and Crm1-dependent nuclear export.

Li C, Andrake M, Dunbrack R, Enders GH. Li C, et al. Mol Cell Biol. 2010 Jan;30(1):116-30. doi: 10.1128/MCB.01876-08. Mol Cell Biol. 2010. PMID: 19858290 Free PMC article.

4

Mapping the epitope of an inhibitory monoclonal antibody to the C-terminal DNA-binding domain of HIV-1 integrase.

Yi J, Cheng H, Andrake MD, Dunbrack RL Jr, Roder H, Skalka AM. Yi J, et al. J Biol Chem. 2002 Apr 5;277(14):12164-74. doi: 10.1074/jbc.M105072200. Epub 2002 Jan 22. J Biol Chem. 2002. PMID: 11805085 Free article.

5

Architecture and assembly of HIV integrase multimers in the absence of DNA substrates.

Bojja RS, Andrake MD, Merkel G, Weigand S, Dunbrack RL Jr, Skalka AM. Bojja RS, et al. J Biol Chem. 2013 Mar 8;288(10):7373-86. doi: 10.1074/jbc.M112.434431. Epub 2013 Jan 14. J Biol Chem. 2013. PMID: 23322775 Free PMC article.

6

BioAssemblyModeler (BAM): user-friendly homology modeling of protein homo- and heterooligomers.

Shapovalov MV, Wang Q, Xu Q, Andrake M, Dunbrack RL Jr. Shapovalov MV, et al. PLoS One. 2014 Jun 12;9(6):e98309. doi: 10.1371/journal.pone.0098309. eCollection 2014. PLoS One. 2014. PMID: 24922057 Free PMC article.

7

Mouse modeling and structural analysis of the p.G307S mutation in human cystathionine β-synthase (CBS) reveal effects on CBS activity but not stability.

Gupta S, Kelow S, Wang L, Andrake MD, Dunbrack RL Jr, Kruger WD. Gupta S, et al. J Biol Chem. 2018 Sep 7;293(36):13921-13931. doi: 10.1074/jbc.RA118.002164. Epub 2018 Jul 20. J Biol Chem. 2018. PMID: 30030379 Free PMC article.

8

A new model for allosteric regulation of phenylalanine hydroxylase: implications for disease and therapeutics.

Jaffe EK, Stith L, Lawrence SH, Andrake M, Dunbrack RL Jr. Jaffe EK, et al. Arch Biochem Biophys. 2013 Feb 15;530(2):73-82. doi: 10.1016/j.abb.2012.12.017. Epub 2013 Jan 11. Arch Biochem Biophys. 2013. PMID: 23296088 Free PMC article.

9

Protein modeling to assess the pathogenicity of rare variants of SERPINA1 in patients suspected of having Alpha 1 Antitrypsin Deficiency.

Kueppers F, Andrake MD, Xu Q, Dunbrack RL Jr, Kim J, Sanders CL. Kueppers F, et al. BMC Med Genet. 2019 Jul 15;20(1):125. doi: 10.1186/s12881-019-0852-5. BMC Med Genet. 2019. PMID: 31307431 Free PMC article.

10

Biological function derived from predicted structures in CASP11.

Huwe PJ, Xu Q, Shapovalov MV, Modi V, Andrake MD, Dunbrack RL Jr. Huwe PJ, et al. Proteins. 2016 Sep;84 Suppl 1(Suppl 1):370-91. doi: 10.1002/prot.24997. Epub 2016 Jun 15. Proteins. 2016. PMID: 27181425 Free PMC article.

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