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Structure-based discovery of inhibitors of Mac1 domain of nonstructural protein-3 of SARS-CoV-2 by machine learning-augmented screening of chemical space.
Ban F, Ravichandran R, Correy GJ, Herasymenko O, Silva M, Ackloo S, Bolotokova A, Chau I, Gibson E, Harding R, Hutchinson A, Loppnau P, Fraser JS, Schapira M, Cherkasov A, Gentile F. Ban F, et al. Among authors: fraser js. bioRxiv [Preprint]. 2025 Sep 9:2025.09.05.674529. doi: 10.1101/2025.09.05.674529. bioRxiv. 2025. PMID: 40964377 Free PMC article. Preprint.
The impact of Library Size and Scale of Testing on Virtual Screening.
Liu F, Mailhot O, Glenn IS, Vigneron SF, Bassim V, Xu X, Fonseca-Valencia K, Smith MS, Radchenko DS, Fraser JS, Moroz YS, Irwin JJ, Shoichet BK. Liu F, et al. Among authors: fraser js. bioRxiv [Preprint]. 2024 Jul 11:2024.07.08.602536. doi: 10.1101/2024.07.08.602536. bioRxiv. 2024. Update in: Nat Chem Biol. 2025 Jul;21(7):1039-1045. doi: 10.1038/s41589-024-01797-w. PMID: 39026784 Free PMC article. Updated. Preprint.
Chemoenzymatic syntheses of fluorine-18-labeled disaccharides from [ 18 F]FDG yield potent sensors of living bacteria in vivo.
Sorlin AM, López-Álvarez M, Rabbitt SJ, Alanizi AA, Shuere R, Bobba KN, Blecha J, Sakhamuri S, Evans MJ, Bayles KW, Flavell RR, Rosenberg OS, Sriram R, Desmet T, Nidetzky B, Engel J, Ohliger MA, Fraser JS, Wilson DM. Sorlin AM, et al. Among authors: fraser js. bioRxiv [Preprint]. 2023 May 20:2023.05.20.541529. doi: 10.1101/2023.05.20.541529. bioRxiv. 2023. Update in: J Am Chem Soc. 2023 Aug 16;145(32):17632-17642. doi: 10.1021/jacs.3c03338. PMID: 37293043 Free PMC article. Updated. Preprint.
Bacteriophages inhibit and evade cGAS-like immune function in bacteria.
Huiting E, Cao X, Ren J, Athukoralage JS, Luo Z, Silas S, An N, Carion H, Zhou Y, Fraser JS, Feng Y, Bondy-Denomy J. Huiting E, et al. Among authors: fraser js. Cell. 2025 Sep 4;188(18):5118. doi: 10.1016/j.cell.2025.08.009. Epub 2025 Aug 22. Cell. 2025. PMID: 40848727 Free PMC article. No abstract available.
AcrIF11 is a potent CRISPR-specific ADP-ribosyltransferase encoded by phage and plasmid.
Chen DF, Roe LT, Yuping L, Borges AL, Zhang JY, Babbar P, Maji S, Stevens MGV, Correy GJ, Diolaiti ME, Smith DH, Ashworth A, Stroud RM, Kelly MJS, Bondy-Denomy J, Fraser JS. Chen DF, et al. Among authors: fraser js. mBio. 2025 Sep 10;16(9):e0169825. doi: 10.1128/mbio.01698-25. Epub 2025 Aug 14. mBio. 2025. PMID: 40810510 Free PMC article.
Coronavirus protein interaction mapping in bat and human cells identifies molecular and genetic switches for immune evasion and replication.
Batra J, Rutkowska M, Zhou Y, Ye C, Adavikolanu R, Young JM, Anand D, Verma S, Gordon M, Malpotra S, Cupic A, Kehrer T, Moen JM, Winters DM, Rojc A, Mena I, Aslam S, Martinez-Romero C, Conde Viñas I, Khalil Z, Farrugia K, Banerjee A, Tussia-Cohen D, Santos MD, Maji S, Muralidharan M, Foussard H, Chen IP, Fuchs R, Felipe CS, Zuliani-Alvarez L, Choudhury P, Obernier K, Gracias S, Suryawanshi R, Ibáñez C, Juste J, Pache L, Taha TY, Jouvenet N, Verba KA, Fraser JS, Demeret C, Stroud RM, van Bakel H, Ott M, Hagai T, Polacco B, Swaney DL, Echeverria I, Bouhaddou M, Eckhardt M, Malik HS, Martinez-Sobrido L, Miorin L, García-Sastre A, Krogan NJ. Batra J, et al. Among authors: fraser js. bioRxiv [Preprint]. 2025 Jul 28:2025.07.26.666918. doi: 10.1101/2025.07.26.666918. bioRxiv. 2025. PMID: 40766693 Free PMC article. Preprint.
224 results