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3,603 results

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Page 1
Industrialization drives convergent microbial and physiological shifts in the human metaorganism.
Poyet M, Rühlemann M, Schaan AP, Ma Y, Moitinho-Silva L, Wacker EM, Jebens H, Patel L, Nguyen LTT, Zimmer A, Plichta D, McDonald D, Stevens C, Agyei A, Afihene MY, Asibey SO, Awuku YA, Badiane AS, Ching LS, Corzett C, Deme A, Dominguez-Rodrigo M, Duah A, Fezeu A, Froment A, Gibbons S, Girard C, Hooker J, Ibrahim F, Iqaluk D, Juimo V, Kettunen P, Lafosse S, Lango-Yaya E, Lehtimäki J, Lim YAL, Mabulla A, Mahachai V, Mohamed RS, Moniz K, Mwikarago IE, Nartey YA, Ndiaye D, Noel M, Onyekwere C, Pin TM, Plymoth A, Roberts L, Ruokolainen L, Rusine J, Segurel L, Shapiro BJ, Sigwazi S, Sistiaga A, Valles K, Vatanen T, Vilaichone RK, Rosenstiel P, Baines J, Franke A, Ellinghaus D, Knight R, Daly M, Xavier RJ, Alm EJ, Groussin M. Poyet M, et al. Among authors: knight r. bioRxiv [Preprint]. 2025 Oct 20:2025.10.20.683358. doi: 10.1101/2025.10.20.683358. bioRxiv. 2025. PMID: 41280098 Free PMC article. Preprint.
Community assembly modeling of microbial evolution within Barrett's esophagus and esophageal adenocarcinoma.
Guccione C, Sfiligoi I, Gonzalez A, Shaffer JP, Kazachkova M, Weng Y, McDonald D, Shah SC, Minot SS, Paulson T, Grady WM, Alexandrov LB, Knight R, Curtius K. Guccione C, et al. Among authors: knight r. bioRxiv [Preprint]. 2025 Jan 16:2025.01.14.633020. doi: 10.1101/2025.01.14.633020. bioRxiv. 2025. Update in: BMC Genomics. 2026 Feb 10;27(1):236. doi: 10.1186/s12864-026-12545-w. PMID: 39868296 Free PMC article. Updated. Preprint.
Medication Use is Associated with Distinct Microbial Features in Anxiety and Depression.
Dilmore AH, Kuplicki R, McDonald D, Kumar M, Estaki M, Youngblut N, Tyakht A, Ackermann G, Blach C, MahmoudianDehkordi S, Dunlop BW, Bhattacharyya S, Guinjoan S, Mandaviya P, Ley RE, Kaddaruh-Dauok R, Paulus MP, Knight R; Alzheimer Gut Microbiome Project Consortium. Dilmore AH, et al. Among authors: knight r. bioRxiv [Preprint]. 2024 Mar 19:2024.03.19.585820. doi: 10.1101/2024.03.19.585820. bioRxiv. 2024. Update in: Mol Psychiatry. 2025 Jun;30(6):2545-2557. doi: 10.1038/s41380-024-02857-2. PMID: 38562901 Free PMC article. Updated. Preprint.
Gut Microbiome Compositional and Functional Features Associate with Alzheimer's Disease Pathology.
Kang JW, Khatib LA, Heston MB, Dilmore AH, Labus JS, Deming Y, Schimmel L, Blach C, McDonald D, Gonzalez A, Bryant M, Sanders K, Schwartz A, Ulland TK, Johnson SC, Asthana S, Carlsson CM, Chin NA, Blennow K, Zetterberg H, Rey FE; Alzheimer Gut Microbiome Project Consortium; Kaddurah-Daouk R, Knight R, Bendlin BB. Kang JW, et al. Among authors: knight r. medRxiv [Preprint]. 2024 Sep 5:2024.09.04.24313004. doi: 10.1101/2024.09.04.24313004. medRxiv. 2024. Update in: Alzheimers Dement. 2025 Jul;21(7):e70417. doi: 10.1002/alz.70417. PMID: 39281749 Free PMC article. Updated. Preprint.
Real-time, multi-pathogen wastewater genomic surveillance with Freyja 2.
Levy JI, Gangavarapu P, Pilz DA, Jesvaghane MA, Steedman A, Zeller M, Gangavarapu K, McDonald D, Libuit K, Kapsak C, Young EL, Agrawal S, Orschler L, Hölzer M, Stachler E, Park DJ, Hinrichs AS, Laurent LC, Knight R, Andersen KG. Levy JI, et al. Among authors: knight r. medRxiv [Preprint]. 2025 Jul 27:2025.07.26.25332245. doi: 10.1101/2025.07.26.25332245. medRxiv. 2025. PMID: 40778124 Free PMC article. Preprint.
Gut Microbiome Multi-Omics and Cognitive Function in the Hispanic Community Health Study/Study of Latinos- Investigation of Neurocognitive Aging.
Palacios N, Gordon S, Wang T, Burk R, Qi Q, Huttenhower C, Gonzalez HM, Knight R, De Carli C, Daviglus M, Lamar M, Telavera G, Tarraf W, Kosciolek T, Cai J, Kaplan RC. Palacios N, et al. Among authors: knight r. medRxiv [Preprint]. 2024 May 17:2024.05.17.24307533. doi: 10.1101/2024.05.17.24307533. medRxiv. 2024. PMID: 38798527 Free PMC article. Preprint.
3,603 results