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Page 1
Industrialization drives convergent microbial and physiological shifts in the human metaorganism.
Poyet M, Rühlemann M, Schaan AP, Ma Y, Moitinho-Silva L, Wacker EM, Jebens H, Patel L, Nguyen LTT, Zimmer A, Plichta D, McDonald D, Stevens C, Agyei A, Afihene MY, Asibey SO, Awuku YA, Badiane AS, Ching LS, Corzett C, Deme A, Dominguez-Rodrigo M, Duah A, Fezeu A, Froment A, Gibbons S, Girard C, Hooker J, Ibrahim F, Iqaluk D, Juimo V, Kettunen P, Lafosse S, Lango-Yaya E, Lehtimäki J, Lim YAL, Mabulla A, Mahachai V, Mohamed RS, Moniz K, Mwikarago IE, Nartey YA, Ndiaye D, Noel M, Onyekwere C, Pin TM, Plymoth A, Roberts L, Ruokolainen L, Rusine J, Segurel L, Shapiro BJ, Sigwazi S, Sistiaga A, Valles K, Vatanen T, Vilaichone RK, Rosenstiel P, Baines J, Franke A, Ellinghaus D, Knight R, Daly M, Xavier RJ, Alm EJ, Groussin M. Poyet M, et al. Among authors: vatanen t. bioRxiv [Preprint]. 2025 Oct 20:2025.10.20.683358. doi: 10.1101/2025.10.20.683358. bioRxiv. 2025. PMID: 41280098 Free PMC article. Preprint.
Trajectories of microbiome-derived bile acids in early life - insights into the progression to islet autoimmunity.
Lamichhane S, Dickens AM, Buchacher T, Lou ET, Charron-Lamoureux V, Kattelus R, Karmacharya P, Pinto da Silva L, Kråkström M, Rasool O, Sen P, Walker C, Patan A, Gentry EC, Arzoomand A, Lakshmikanth T, Mikeš J, Mebrahtu A, Vatanen T, Raffatellu M, Zengler K, Hyötyläinen T, Xavier RJ, Brodin P, Lahesmaa R, Dorrestein PC, Knip M, Orešič M. Lamichhane S, et al. Among authors: vatanen t. medRxiv [Preprint]. 2025 Feb 24:2025.02.18.25322275. doi: 10.1101/2025.02.18.25322275. medRxiv. 2025. Update in: Nat Commun. 2025 Dec 3;17(1):38. doi: 10.1038/s41467-025-66619-6. PMID: 40061321 Free PMC article. Updated. Preprint.
Phosphorothioate DNA modification by BREX type 4 systems in the human gut microbiome.
Yuan Y, DeMott MS, Byrne SR, Flores K, Poyet M, Groussin M, Berdy B, Bahunde JR, Girard C, Lehtimäki J, Mabulla AZP, Mwikarago IE, Nartey YA, Nguyen LTT, Onyekwere CA, Roberts LR, Shapiro BJ, Vatanen T, Comstock LE, Alm EJ, Dedon PC. Yuan Y, et al. Among authors: vatanen t. Nat Commun. 2026 Jan 22;17(1):1717. doi: 10.1038/s41467-026-68412-5. Nat Commun. 2026. PMID: 41571653 Free PMC article.
Cohort-specific determinants of donor strain engraftment following multi-donor faecal microbiota transplantation in two randomised clinical trials.
Behling AH, Portlock T, Ho D, Wilson BC, Paramsothy S, Kamm MA, Cutfield WS, Kaakoush NO, O'Sullivan JM, Vatanen T. Behling AH, et al. Among authors: vatanen t. Gut Microbes. 2025 Dec 31;17(1):2597628. doi: 10.1080/19490976.2025.2597628. Epub 2025 Dec 11. Gut Microbes. 2025. PMID: 41378445 Free PMC article. Clinical Trial.
Microbiome-derived bile acid signatures in early life and their association with islet autoimmunity.
Lamichhane S, Dickens AM, Buchacher T, Lou T, Charron-Lamoureux V, Kattelus R, Karmacharya P, da Silva LP, Kråkström M, Rasool O, Sen P, Walker C, Patan A, Gentry EC, Zuffa S, Arzoomand A, Lakshmikanth T, Mikeš J, Mebrahtu A, Vatanen T, Raffatellu M, Zengler K, Hyötyläinen T, Xavier RJ, Brodin P, Lahesmaa R, Dorrestein PC, Knip M, Orešič M. Lamichhane S, et al. Among authors: vatanen t. Nat Commun. 2025 Dec 3;17(1):38. doi: 10.1038/s41467-025-66619-6. Nat Commun. 2025. PMID: 41339624 Free PMC article.
88 results