Similar articles for PMID: 38010338

Year	Number of Results
2015	1
2016	2
2017	2
2018	5
2019	13
2020	18
2021	10
2022	20
2023	29
2024	5
2025	0

1

Development of a novel streamlined workflow (AACRE) and database (inCREDBle) for genomic analysis of carbapenem-resistant Enterobacterales.

Alioto TS, Gut M, Rodiño-Janeiro BK, Cruz F, Gómez-Garrido J, Vázquez-Ucha JC, Mata C, Antoni R, Briansó F, Dabad M, Casals E, Ingham M, Álvarez-Tejado M, Bou G, Gut IG. Alioto TS, et al. Microb Genom. 2023 Nov;9(11):001132. doi: 10.1099/mgen.0.001132. Microb Genom. 2023. PMID: 38010338 Free PMC article.

2

Comparing antimicrobial resistant genes and phenotypes across multiple sequencing platforms and assays for Enterobacterales clinical isolates.

Rose R, Nolan DJ, Ashcraft D, Feehan AK, Velez-Climent L, Huston C, Lain B, Rosenthal S, Miele L, Fogel GB, Pankey G, Garcia-Diaz J, Lamers SL. Rose R, et al. BMC Microbiol. 2023 Aug 18;23(1):225. doi: 10.1186/s12866-023-02975-x. BMC Microbiol. 2023. PMID: 37596530 Free PMC article.

3

Applying Rapid Whole-Genome Sequencing To Predict Phenotypic Antimicrobial Susceptibility Testing Results among Carbapenem-Resistant Klebsiella pneumoniae Clinical Isolates.

Tamma PD, Fan Y, Bergman Y, Pertea G, Kazmi AQ, Lewis S, Carroll KC, Schatz MC, Timp W, Simner PJ. Tamma PD, et al. Antimicrob Agents Chemother. 2018 Dec 21;63(1):e01923-18. doi: 10.1128/AAC.01923-18. Print 2019 Jan. Antimicrob Agents Chemother. 2018. PMID: 30373801 Free PMC article.

4

Tracking of Antibiotic Resistance Transfer and Rapid Plasmid Evolution in a Hospital Setting by Nanopore Sequencing.

Peter S, Bosio M, Gross C, Bezdan D, Gutierrez J, Oberhettinger P, Liese J, Vogel W, Dörfel D, Berger L, Marschal M, Willmann M, Gut I, Gut M, Autenrieth I, Ossowski S. Peter S, et al. mSphere. 2020 Aug 19;5(4):e00525-20. doi: 10.1128/mSphere.00525-20. mSphere. 2020. PMID: 32817379 Free PMC article.

5

Comparison of R9.4.1/Kit10 and R10/Kit12 Oxford Nanopore flowcells and chemistries in bacterial genome reconstruction.

Sanderson ND, Kapel N, Rodger G, Webster H, Lipworth S, Street TL, Peto T, Crook D, Stoesser N. Sanderson ND, et al. Microb Genom. 2023 Jan;9(1):mgen000910. doi: 10.1099/mgen.0.000910. Microb Genom. 2023. PMID: 36748454 Free PMC article.

6

Genomic and clinical characterisation of multidrug-resistant carbapenemase-producing ST231 and ST16 Klebsiella pneumoniae isolates colonising patients at Siriraj hospital, Bangkok, Thailand from 2015 to 2017.

Boonyasiri A, Jauneikaite E, Brinkac LM, Greco C, Lerdlamyong K, Tangkoskul T, Nguyen K, Thamlikitkul V, Fouts DE. Boonyasiri A, et al. BMC Infect Dis. 2021 Feb 4;21(1):142. doi: 10.1186/s12879-021-05790-9. BMC Infect Dis. 2021. PMID: 33541274 Free PMC article.

7

Comprehensive Genome Analysis of Carbapenemase-Producing Enterobacter spp.: New Insights into Phylogeny, Population Structure, and Resistance Mechanisms.

Chavda KD, Chen L, Fouts DE, Sutton G, Brinkac L, Jenkins SG, Bonomo RA, Adams MD, Kreiswirth BN. Chavda KD, et al. mBio. 2016 Dec 13;7(6):e02093-16. doi: 10.1128/mBio.02093-16. mBio. 2016. PMID: 27965456 Free PMC article.

8

Whole genome sequencing characterization of Slovenian carbapenem-resistant Klebsiella pneumoniae, including OXA-48 and NDM-1 producing outbreak isolates.

Benulič K, Pirš M, Couto N, Chlebowicz M, Rossen JWA, Zorec TM, Seme K, Poljak M, Lejko Zupanc T, Ružić-Sabljić E, Cerar T. Benulič K, et al. PLoS One. 2020 Apr 13;15(4):e0231503. doi: 10.1371/journal.pone.0231503. eCollection 2020. PLoS One. 2020. PMID: 32282829 Free PMC article.

9

Clinical and molecular characteristics and risk factors for patients acquiring carbapenemase-producing and non-carbapenemase-producing carbapenem-nonsusceptible-Enterobacterales bacteremia.

Wu AY, Chang H, Wang NY, Sun FJ, Liu CP. Wu AY, et al. J Microbiol Immunol Infect. 2022 Dec;55(6 Pt 2):1229-1238. doi: 10.1016/j.jmii.2021.10.008. Epub 2021 Nov 9. J Microbiol Immunol Infect. 2022. PMID: 34824020 Free article.

10

Genomic Epidemiology of Complex, Multispecies, Plasmid-Borne bla_KPC Carbapenemase in Enterobacterales in the United Kingdom from 2009 to 2014.

Stoesser N, Phan HTT, Seale AC, Aiken Z, Thomas S, Smith M, Wyllie D, George R, Sebra R, Mathers AJ, Vaughan A, Peto TEA, Ellington MJ, Hopkins KL, Crook DW, Orlek A, Welfare W, Cawthorne J, Lenney C, Dodgson A, Woodford N, Walker AS; TRACE Investigators’ Group. Stoesser N, et al. Antimicrob Agents Chemother. 2020 Apr 21;64(5):e02244-19. doi: 10.1128/AAC.02244-19. Print 2020 Apr 21. Antimicrob Agents Chemother. 2020. PMID: 32094139 Free PMC article.

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