Skip to main page content
U.S. flag

An official website of the United States government

Dot gov

The .gov means it’s official.
Federal government websites often end in .gov or .mil. Before sharing sensitive information, make sure you’re on a federal government site.

Https

The site is secure.
The https:// ensures that you are connecting to the official website and that any information you provide is encrypted and transmitted securely.

Access keys NCBI Homepage MyNCBI Homepage Main Content Main Navigation

Search Page

Filters

My Custom Filters

Results by year

Table representation of search results timeline featuring number of search results per year.

Year Number of Results
2013 1
2014 2
2015 1
2020 4
2021 6
2022 6
2023 3
2024 5
2025 7

Publication date

Text availability

Article attribute

Article type

Additional filters

Article Language

Species

Sex

Age

Other

Search Results

33 results

Results by year

Filters applied: . Clear all
Page 1
The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance.
Tegally H, San JE, Cotten M, Moir M, Tegomoh B, Mboowa G, Martin DP, Baxter C, Lambisia AW, Diallo A, Amoako DG, Diagne MM, Sisay A, Zekri AN, Gueye AS, Sangare AK, Ouedraogo AS, Sow A, Musa AO, Sesay AK, Abias AG, Elzagheid AI, Lagare A, Kemi AS, Abar AE, Johnson AA, Fowotade A, Oluwapelumi AO, Amuri AA, Juru A, Kandeil A, Mostafa A, Rebai A, Sayed A, Kazeem A, Balde A, Christoffels A, Trotter AJ, Campbell A, Keita AK, Kone A, Bouzid A, Souissi A, Agweyu A, Naguib A, Gutierrez AV, Nkeshimana A, Page AJ, Yadouleton A, Vinze A, Happi AN, Chouikha A, Iranzadeh A, Maharaj A, Batchi-Bouyou AL, Ismail A, Sylverken AA, Goba A, Femi A, Sijuwola AE, Marycelin B, Salako BL, Oderinde BS, Bolajoko B, Diarra B, Herring BL, Tsofa B, Lekana-Douki B, Mvula B, Njanpop-Lafourcade BM, Marondera BT, Khaireh BA, Kouriba B, Adu B, Pool B, McInnis B, Brook C, Williamson C, Nduwimana C, Anscombe C, Pratt CB, Scheepers C, Akoua-Koffi CG, Agoti CN, Mapanguy CM, Loucoubar C, Onwuamah CK, Ihekweazu C, Malaka CN, Peyrefitte C, Grace C, Omoruyi CE, Rafaï CD, Morang'a CM, Erameh C, Lule DB, Bridges DJ, Mukadi-Bamuleka D, Park D, Rasmussen DA, Baker D, Nokes DJ, Ssemwanga D, Tshiabuila D, Amuzu DSY, Goedhals D,… See abstract for full author list ➔ Tegally H, et al. Among authors: xavier js. Science. 2022 Oct 7;378(6615):eabq5358. doi: 10.1126/science.abq5358. Epub 2022 Oct 7. Science. 2022. PMID: 36108049 Free PMC article.
Alignment-free viral sequence classification at scale.
van Zyl DJ, Dunaiski M, Tegally H, Baxter C, de Oliveira T, Xavier JS; INFORM Africa research study group. van Zyl DJ, et al. Among authors: xavier js. BMC Genomics. 2025 Apr 18;26(1):389. doi: 10.1186/s12864-025-11554-5. BMC Genomics. 2025. PMID: 40251515 Free PMC article.
SARS-CoV-2 Africa dashboard for real-time COVID-19 information.
Xavier JS, Moir M, Tegally H, Sitharam N, Abdool Karim W, San JE, Linhares J, Wilkinson E, Ascher DB, Baxter C, Pires DEV, de Oliveira T. Xavier JS, et al. Nat Microbiol. 2023 Jan;8(1):1-4. doi: 10.1038/s41564-022-01276-9. Nat Microbiol. 2023. PMID: 36550316 Free PMC article.
ThermoMutDB: a thermodynamic database for missense mutations.
Xavier JS, Nguyen TB, Karmarkar M, Portelli S, Rezende PM, Velloso JPL, Ascher DB, Pires DEV. Xavier JS, et al. Nucleic Acids Res. 2021 Jan 8;49(D1):D475-D479. doi: 10.1093/nar/gkaa925. Nucleic Acids Res. 2021. PMID: 33095862 Free PMC article.
Identifying Genotype-Phenotype Correlations via Integrative Mutation Analysis.
Airey E, Portelli S, Xavier JS, Myung YC, Silk M, Karmakar M, Velloso JPL, Rodrigues CHM, Parate HH, Garg A, Al-Jarf R, Barr L, Geraldo JA, Rezende PM, Pires DEV, Ascher DB. Airey E, et al. Among authors: xavier js. Methods Mol Biol. 2021;2190:1-32. doi: 10.1007/978-1-0716-0826-5_1. Methods Mol Biol. 2021. PMID: 32804359
Identifying genomic surveillance gaps in Africa for the global public health response to West Nile virus: a systematic review.
Moir M, Sitharam N, Hofstra LM, Dor G, Mwanyika G, Ramphal Y, Reichmuth ML, San JE, Gifford R, Wilkinson E, Tshiabuila D, Preiser W, Konou AA, Bitew M, Onoja AB, Paganotti GM, Abera A, Maror JA, Kayiwa J, Abuelmaali S, Lusamaki EK; CLIMADE Consortium; Venter M, Burt F, Baxter C, Lessells R, de Oliveira T, Tegally H. Moir M, et al. Lancet Microbe. 2025 Oct;6(10):101176. doi: 10.1016/j.lanmic.2025.101176. Epub 2025 Jul 24. Lancet Microbe. 2025. PMID: 40716444 Free article.
33 results