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Page 1
Global diversity and antimicrobial resistance of typhoid fever pathogens: Insights from a meta-analysis of 13,000 Salmonella Typhi genomes.
Carey ME, Dyson ZA, Ingle DJ, Amir A, Aworh MK, Chattaway MA, Chew KL, Crump JA, Feasey NA, Howden BP, Keddy KH, Maes M, Parry CM, Van Puyvelde S, Webb HE, Afolayan AO, Alexander AP, Anandan S, Andrews JR, Ashton PM, Basnyat B, Bavdekar A, Bogoch II, Clemens JD, da Silva KE, De A, de Ligt J, Diaz Guevara PL, Dolecek C, Dutta S, Ehlers MM, Francois Watkins L, Garrett DO, Godbole G, Gordon MA, Greenhill AR, Griffin C, Gupta M, Hendriksen RS, Heyderman RS, Hooda Y, Hormazabal JC, Ikhimiukor OO, Iqbal J, Jacob JJ, Jenkins C, Jinka DR, John J, Kang G, Kanteh A, Kapil A, Karkey A, Kariuki S, Kingsley RA, Koshy RM, Lauer AC, Levine MM, Lingegowda RK, Luby SP, Mackenzie GA, Mashe T, Msefula C, Mutreja A, Nagaraj G, Nagaraj S, Nair S, Naseri TK, Nimarota-Brown S, Njamkepo E, Okeke IN, Perumal SPB, Pollard AJ, Pragasam AK, Qadri F, Qamar FN, Rahman SIA, Rambocus SD, Rasko DA, Ray P, Robins-Browne R, Rongsen-Chandola T, Rutanga JP, Saha SK, Saha S, Saigal K, Sajib MSI, Seidman JC, Shakya J, Shamanna V, Shastri J, Shrestha R, Sia S, Sikorski MJ, Singh A, Smith AM, Tagg KA, Tamrakar D, Tanmoy AM, Thomas M, Thomas MS, Thomsen R, Thomson NR, Tupua S, Vaidya K, Valcanis M, Veeraraghavan B,… See abstract for full author list ➔ Carey ME, et al. Among authors: afolayan ao. Elife. 2023 Sep 12;12:e85867. doi: 10.7554/eLife.85867. Elife. 2023. PMID: 37697804 Free PMC article.
Typhi Mykrobe: fast and accurate lineage identification and antimicrobial resistance genotyping directly from sequence reads for the typhoid fever agent Salmonella Typhi.
Ingle DJ, Hawkey J, Hunt M, Iqbal Z, Keane JA, Afolayan AO, Ahmed N, Andleeb S, Ashton PM, Bogoch II, Carey ME, Chattaway MA, Crump JA, Guevara PD, Howden BP, Izumiya H, Jacob JJ, Judd LM, Kapil A, Keddy KH, Kim JY, Levine MM, Morita M, Nair S, Octavia S, Okeke IN, Osadebamwen PE, Rahman SIA, Rokney A, Rasko DA, Shamanna V, Sikorski MJ, Smith AM, Sunmonu GT, Tagg KA, Wick RR, Dyson ZA, Holt KE; Global Typhoid Genomics Consortium. Ingle DJ, et al. Among authors: afolayan ao. bioRxiv [Preprint]. 2025 Jul 31:2024.09.30.613582. doi: 10.1101/2024.09.30.613582. bioRxiv. 2025. Update in: Genome Med. 2025 Oct 24;17(1):130. doi: 10.1186/s13073-025-01551-4. PMID: 40766357 Free PMC article. Updated. Preprint.
Overcoming Data Bottlenecks in Genomic Pathogen Surveillance.
Afolayan AO, Bernal JF, Gayeta JM, Masim ML, Shamanna V, Abrudan M, Abudahab K, Argimón S, Carlos CC, Sia S, Ravikumar KL, Okeke IN, Donado-Godoy P, Aanensen DM, Underwood A; NIHR Global Health Research Unit on Genomic Surveillance of Antimicrobial Resistance. Afolayan AO, et al. Clin Infect Dis. 2021 Dec 1;73(Suppl_4):S267-S274. doi: 10.1093/cid/ciab785. Clin Infect Dis. 2021. PMID: 34850839 Free PMC article.
Clones and Clusters of Antimicrobial-Resistant Klebsiella From Southwestern Nigeria.
Afolayan AO, Oaikhena AO, Aboderin AO, Olabisi OF, Amupitan AA, Abiri OV, Ogunleye VO, Odih EE, Adeyemo AT, Adeyemo AT, Obadare TO, Abrudan M, Argimón S, David S, Kekre M, Underwood A, Egwuenu A, Ihekweazu C, Aanensen DM, Okeke IN; NIHR Global Health Research Unit on Genomic Surveillance of Antimicrobial Resistance. Afolayan AO, et al. Clin Infect Dis. 2021 Dec 1;73(Suppl_4):S308-S315. doi: 10.1093/cid/ciab769. Clin Infect Dis. 2021. PMID: 34850837 Free PMC article.
Knowledge and Attitudes of Blood Donors Toward Sickle Cell Anemia in Ibadan.
Amusat OA, Babatunde AO, Olawuyi DA, Ogundijo DA, Aderohunmu ZO, Afolayan AO, Alao UH, Akintola AA, Oseni AO, Abdulrasheed HA. Amusat OA, et al. Among authors: afolayan ao. Cureus. 2024 Sep 25;16(9):e70199. doi: 10.7759/cureus.70199. eCollection 2024 Sep. Cureus. 2024. PMID: 39463608 Free PMC article.
39 results