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Year Number of Results
1947 1
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2002 2
2003 1
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2008 5
2009 5
2010 8
2011 6
2012 8
2013 1
2014 6
2015 7
2016 9
2017 7
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2023 23
2024 17
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217 results

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Page 1
Image-based cell phenotyping with deep learning.
Pratapa A, Doron M, Caicedo JC. Pratapa A, et al. Among authors: caicedo jc. Curr Opin Chem Biol. 2021 Dec;65:9-17. doi: 10.1016/j.cbpa.2021.04.001. Epub 2021 May 21. Curr Opin Chem Biol. 2021. PMID: 34023800 Review.
Reproducible image-based profiling with Pycytominer.
Serrano E, Chandrasekaran SN, Bunten D, Brewer KI, Tomkinson J, Kern R, Bornholdt M, Fleming SJ, Pei R, Arevalo J, Tsang H, Rubinetti V, Tromans-Coia C, Becker T, Weisbart E, Bunne C, Kalinin AA, Senft R, Taylor SJ, Jamali N, Adeboye A, Abbasi HS, Goodman A, Caicedo JC, Carpenter AE, Cimini BA, Singh S, Way GP. Serrano E, et al. Among authors: caicedo jc. Nat Methods. 2025 Apr;22(4):677-680. doi: 10.1038/s41592-025-02611-8. Epub 2025 Mar 3. Nat Methods. 2025. PMID: 40032995 Free PMC article.
Prioritizing Early Disease Intervention.
Caicedo HH, Darrow JJ, Caicedo JC, Pentland A. Caicedo HH, et al. Among authors: caicedo jc. Ther Innov Regul Sci. 2023 Nov;57(6):1148-1152. doi: 10.1007/s43441-023-00569-3. Epub 2023 Sep 5. Ther Innov Regul Sci. 2023. PMID: 37668879
A multicentre outcome analysis to define global benchmarks for donation after circulatory death liver transplantation.
Schlegel A, van Reeven M, Croome K, Parente A, Dolcet A, Widmer J, Meurisse N, De Carlis R, Hessheimer A, Jochmans I, Mueller M, van Leeuwen OB, Nair A, Tomiyama K, Sherif A, Elsharif M, Kron P, van der Helm D, Borja-Cacho D, Bohorquez H, Germanova D, Dondossola D, Olivieri T, Camagni S, Gorgen A, Patrono D, Cescon M, Croome S, Panconesi R, Carvalho MF, Ravaioli M, Caicedo JC, Loss G, Lucidi V, Sapisochin G, Romagnoli R, Jassem W, Colledan M, De Carlis L, Rossi G, Di Benedetto F, Miller CM, van Hoek B, Attia M, Lodge P, Hernandez-Alejandro R, Detry O, Quintini C, Oniscu GC, Fondevila C, Malagó M, Pirenne J, IJzermans JNM, Porte RJ, Dutkowski P, Taner CB, Heaton N, Clavien PA, Polak WG, Muiesan P; DCD Collaborator Group. Schlegel A, et al. Among authors: caicedo jc. J Hepatol. 2022 Feb;76(2):371-382. doi: 10.1016/j.jhep.2021.10.004. Epub 2021 Oct 14. J Hepatol. 2022. PMID: 34655663 Free article.
Patterns of Growth and Decline in Lung Function in Persistent Childhood Asthma.
McGeachie MJ, Yates KP, Zhou X, Guo F, Sternberg AL, Van Natta ML, Wise RA, Szefler SJ, Sharma S, Kho AT, Cho MH, Croteau-Chonka DC, Castaldi PJ, Jain G, Sanyal A, Zhan Y, Lajoie BR, Dekker J, Stamatoyannopoulos J, Covar RA, Zeiger RS, Adkinson NF, Williams PV, Kelly HW, Grasemann H, Vonk JM, Koppelman GH, Postma DS, Raby BA, Houston I, Lu Q, Fuhlbrigge AL, Tantisira KG, Silverman EK, Tonascia J, Weiss ST, Strunk RC. McGeachie MJ, et al. N Engl J Med. 2016 May 12;374(19):1842-1852. doi: 10.1056/NEJMoa1513737. N Engl J Med. 2016. PMID: 27168434 Free PMC article. Clinical Trial.
Roadmap on Deep Learning for Microscopy.
Volpe G, Wählby C, Tian L, Hecht M, Yakimovich A, Monakhova K, Waller L, Sbalzarini IF, Metzler CA, Xie M, Zhang K, Lenton ICD, Rubinsztein-Dunlop H, Brunner D, Bai B, Ozcan A, Midtvedt D, Wang H, Sladoje N, Lindblad J, Smith JT, Ochoa M, Barroso M, Intes X, Qiu T, Yu LY, You S, Liu Y, Ziatdinov MA, Kalinin SV, Sheridan A, Manor U, Nehme E, Goldenberg O, Shechtman Y, Moberg HK, Langhammer C, Špačková B, Helgadottir S, Midtvedt B, Argun A, Thalheim T, Cichos F, Bo S, Hubatsch L, Pineda J, Manzo C, Bachimanchi H, Selander E, Homs-Corbera A, Fränzl M, de Haan K, Rivenson Y, Korczak Z, Adiels CB, Mijalkov M, Veréb D, Chang YW, Pereira JB, Matuszewski D, Kylberg G, Sintorn IM, Caicedo JC, Cimini BA, Bell MAL, Saraiva BM, Jacquemet G, Henriques R, Ouyang W, Le T, Gómez-de-Mariscal E, Sage D, Muñoz-Barrutia A, Lindqvist EJ, Bergman J. Volpe G, et al. Among authors: caicedo jc. ArXiv [Preprint]. 2023 Mar 7:arXiv:2303.03793v1. ArXiv. 2023. PMID: 36945686 Free PMC article. Preprint.
Reproducible image-based profiling with Pycytominer.
Serrano E, Chandrasekaran SN, Bunten D, Brewer KI, Tomkinson J, Kern R, Bornholdt M, Fleming S, Pei R, Arevalo J, Tsang H, Rubinetti V, Tromans-Coia C, Becker T, Weisbart E, Bunne C, Kalinin AA, Senft R, Taylor SJ, Jamali N, Adeboye A, Abbasi HS, Goodman A, Caicedo JC, Carpenter AE, Cimini BA, Singh S, Way GP. Serrano E, et al. Among authors: caicedo jc. ArXiv [Preprint]. 2024 Jul 2:arXiv:2311.13417v2. ArXiv. 2024. Update in: Nat Methods. 2025 Apr;22(4):677-680. doi: 10.1038/s41592-025-02611-8. PMID: 38045474 Free PMC article. Updated. Preprint.
Label-Free Leukemia Monitoring by Computer Vision.
Doan M, Case M, Masic D, Hennig H, McQuin C, Caicedo J, Singh S, Goodman A, Wolkenhauer O, Summers HD, Jamieson D, Delft FV, Filby A, Carpenter AE, Rees P, Irving J. Doan M, et al. Among authors: caicedo j. Cytometry A. 2020 Apr;97(4):407-414. doi: 10.1002/cyto.a.23987. Epub 2020 Feb 24. Cytometry A. 2020. PMID: 32091180 Free PMC article.
Applications in image-based profiling of perturbations.
Caicedo JC, Singh S, Carpenter AE. Caicedo JC, et al. Curr Opin Biotechnol. 2016 Jun;39:134-142. doi: 10.1016/j.copbio.2016.04.003. Epub 2016 Apr 17. Curr Opin Biotechnol. 2016. PMID: 27089218 Free article. Review.
217 results