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Biosynthetic potential of the global ocean microbiome.
Paoli L, Ruscheweyh HJ, Forneris CC, Hubrich F, Kautsar S, Bhushan A, Lotti A, Clayssen Q, Salazar G, Milanese A, Carlström CI, Papadopoulou C, Gehrig D, Karasikov M, Mustafa H, Larralde M, Carroll LM, Sánchez P, Zayed AA, Cronin DR, Acinas SG, Bork P, Bowler C, Delmont TO, Gasol JM, Gossert AD, Kahles A, Sullivan MB, Wincker P, Zeller G, Robinson SL, Piel J, Sunagawa S. Paoli L, et al. Among authors: cronin dr. Nature. 2022 Jul;607(7917):111-118. doi: 10.1038/s41586-022-04862-3. Epub 2022 Jun 22. Nature. 2022. PMID: 35732736 Free PMC article.
Synthesizing Signaling Pathways from Temporal Phosphoproteomic Data.
Köksal AS, Beck K, Cronin DR, McKenna A, Camp ND, Srivastava S, MacGilvray ME, Bodík R, Wolf-Yadlin A, Fraenkel E, Fisher J, Gitter A. Köksal AS, et al. Among authors: cronin dr. Cell Rep. 2018 Sep 25;24(13):3607-3618. doi: 10.1016/j.celrep.2018.08.085. Cell Rep. 2018. PMID: 30257219 Free PMC article.
Prokaryotic-virus-encoded auxiliary metabolic genes throughout the global oceans.
Tian F, Wainaina JM, Howard-Varona C, Domínguez-Huerta G, Bolduc B, Gazitúa MC, Smith G, Gittrich MR, Zablocki O, Cronin DR, Eveillard D, Hallam SJ, Sullivan MB. Tian F, et al. Among authors: cronin dr. Microbiome. 2024 Aug 29;12(1):159. doi: 10.1186/s40168-024-01876-z. Microbiome. 2024. PMID: 39198891 Free PMC article.
Long-read powered viral metagenomics in the oligotrophic Sargasso Sea.
Warwick-Dugdale J, Tian F, Michelsen ML, Cronin DR, Moore K, Farbos A, Chittick L, Bell A, Zayed AA, Buchholz HH, Bolanos LM, Parsons RJ, Allen MJ, Sullivan MB, Temperton B. Warwick-Dugdale J, et al. Among authors: cronin dr. Nat Commun. 2024 May 14;15(1):4089. doi: 10.1038/s41467-024-48300-6. Nat Commun. 2024. PMID: 38744831 Free PMC article.
Microbiome-metabolite linkages drive greenhouse gas dynamics over a permafrost thaw gradient.
Freire-Zapata V, Holland-Moritz H, Cronin DR, Aroney S, Smith DA, Wilson RM, Ernakovich JG, Woodcroft BJ, Bagby SC; EMERGE 2012 Field Team; EMERGE Biology Integration Coordinators; Rich VI, Sullivan MB, Stegen JC, Tfaily MM. Freire-Zapata V, et al. Among authors: cronin dr. Nat Microbiol. 2024 Nov;9(11):2892-2908. doi: 10.1038/s41564-024-01800-z. Epub 2024 Oct 1. Nat Microbiol. 2024. PMID: 39354152 Free PMC article.
Microbial polyphenol metabolism is part of the thawing permafrost carbon cycle.
McGivern BB, Cronin DR, Ellenbogen JB, Borton MA, Knutson EL, Freire-Zapata V, Bouranis JA, Bernhardt L, Hernandez AI, Flynn RM, Woyda R, Cory AB, Wilson RM, Chanton JP, Woodcroft BJ, Ernakovich JG, Tfaily MM, Sullivan MB, Tyson GW, Rich VI, Hagerman AE, Wrighton KC. McGivern BB, et al. Among authors: cronin dr. Nat Microbiol. 2024 Jun;9(6):1454-1466. doi: 10.1038/s41564-024-01691-0. Epub 2024 May 28. Nat Microbiol. 2024. PMID: 38806673 Free PMC article.
Methylotrophy in the Mire: direct and indirect routes for methane production in thawing permafrost.
Ellenbogen JB, Borton MA, McGivern BB, Cronin DR, Hoyt DW, Freire-Zapata V, McCalley CK, Varner RK, Crill PM, Wehr RA, Chanton JP, Woodcroft BJ, Tfaily MM, Tyson GW, Rich VI, Wrighton KC. Ellenbogen JB, et al. Among authors: cronin dr. mSystems. 2024 Jan 23;9(1):e0069823. doi: 10.1128/msystems.00698-23. Epub 2023 Dec 8. mSystems. 2024. PMID: 38063415 Free PMC article.