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Page 1
Showing results for motif i
Search for Motiul I instead (1 results)
Phase Separation and Neurodegenerative Diseases: A Disturbance in the Force.
Zbinden A, Pérez-Berlanga M, De Rossi P, Polymenidou M. Zbinden A, et al. Dev Cell. 2020 Oct 12;55(1):45-68. doi: 10.1016/j.devcel.2020.09.014. Dev Cell. 2020. PMID: 33049211 Free article. Review.
Protein aggregation is the main hallmark of neurodegenerative diseases. Many proteins found in pathological inclusions are known to undergo liquid-liquid phase separation, a reversible process of molecular self-assembly. Emerging evidence supports the hypothesis that aberr
Protein aggregation is the main hallmark of neurodegenerative diseases. Many proteins found in pathological inclusions are known to u
Affinity and specificity of motif-based protein-protein interactions.
Ivarsson Y, Jemth P. Ivarsson Y, et al. Curr Opin Struct Biol. 2019 Feb;54:26-33. doi: 10.1016/j.sbi.2018.09.009. Epub 2018 Oct 24. Curr Opin Struct Biol. 2019. PMID: 30368054 Review.
It is becoming increasingly clear that eukaryotic cell physiology is largely controlled by protein-protein interactions involving disordered protein regions, which usually interact with globular domains in a coupled binding and folding reaction. Severa …
It is becoming increasingly clear that eukaryotic cell physiology is largely controlled by protein-protein interactions involv …
Emerging Features of Linear Motif-Binding Hub Proteins.
Jespersen N, Barbar E. Jespersen N, et al. Trends Biochem Sci. 2020 May;45(5):375-384. doi: 10.1016/j.tibs.2020.01.004. Epub 2020 Feb 20. Trends Biochem Sci. 2020. PMID: 32311332 Review.
Although this distinguishes some features of hub protein/partner interactions, the increasing literature requires an expanded categorization of molecular and functional properties. ...We propose a new class of structural linear motif-binding hub proteins (LMB-hubs) …
Although this distinguishes some features of hub protein/partner interactions, the increasing literature requires an expanded categor …
Molecular switches in GPCRs.
Filipek S. Filipek S. Curr Opin Struct Biol. 2019 Apr;55:114-120. doi: 10.1016/j.sbi.2019.03.017. Epub 2019 May 10. Curr Opin Struct Biol. 2019. PMID: 31082695 Review.
The switches are usually associated with conserved structural motifs on transmembrane helices (TMs), and they are accompanied by adjacent residues which provide the signal to the central residue in the toggle switch. ...
The switches are usually associated with conserved structural motifs on transmembrane helices (TMs), and they are accompanied by adja …
Modulation of peroxisomal import by the PEX13 SH3 domain and a proximal FxxxF binding motif.
Gaussmann S, Peschel R, Ott J, Zak KM, Sastre J, Delhommel F, Popowicz GM, Boekhoven J, Schliebs W, Erdmann R, Sattler M. Gaussmann S, et al. Nat Commun. 2024 Apr 18;15(1):3317. doi: 10.1038/s41467-024-47605-w. Nat Commun. 2024. PMID: 38632234 Free PMC article.
Strikingly, intramolecular interaction of the PEX13 FxxxF motif regulates binding of PEX5 WxxxF/Y motifs to the PEX13 SH3 domain. Crystal structures reveal how FxxxF and WxxxF/Y motifs are recognized by a non-canonical surface on the SH3 domain. The PEX13 Fxx …
Strikingly, intramolecular interaction of the PEX13 FxxxF motif regulates binding of PEX5 WxxxF/Y motifs to the PEX13 SH3 doma …
Defining short linear motif binding determinants by phage display-based deep mutational scanning.
Benz C, Maassen L, Simonetti L, Mihalic F, Lindqvist R, Tsitsa I, Konstantinou A, Jemth P, Överby AK, Davey NE, Ivarsson Y. Benz C, et al. Protein Sci. 2025 Jun;34(6):e70174. doi: 10.1002/pro.70174. Protein Sci. 2025. PMID: 40411416 Free PMC article.
Comparison with a set of reference motifs from the eukaryotic linear motif (ELM) database confirmed that the DMS by phage display analysis correctly identifies known motif binding determinants and provides novel insights into specificity determinants, includi …
Comparison with a set of reference motifs from the eukaryotic linear motif (ELM) database confirmed that the DMS by phage disp …
Strategies to Develop Inhibitors of Motif-Mediated Protein-Protein Interactions as Drug Leads.
Corbi-Verge C, Garton M, Nim S, Kim PM. Corbi-Verge C, et al. Annu Rev Pharmacol Toxicol. 2017 Jan 6;57:39-60. doi: 10.1146/annurev-pharmtox-010716-104805. Epub 2016 Sep 8. Annu Rev Pharmacol Toxicol. 2017. PMID: 27618737 Review.
Protein-protein interactions are fundamental for virtually all functions of the cell. A large fraction of these interactions involve short peptide motifs, and there has been increased interest in targeting them using peptide-based therapeutics. ...In this rev
Protein-protein interactions are fundamental for virtually all functions of the cell. A large fraction of these interactions i
Using Linear Motif Database Resources to Identify SH2 Domain Binders.
Sámano-Sánchez H, Gibson TJ, Chemes LB. Sámano-Sánchez H, et al. Methods Mol Biol. 2023;2705:153-197. doi: 10.1007/978-1-0716-3393-9_9. Methods Mol Biol. 2023. PMID: 37668974
The SH2-binding phosphotyrosine class of short linear motifs (SLiMs) are key conditional regulatory elements, particularly in signaling protein complexes beneath the cell's plasma membrane. ...Researchers can take advantage of bioinformatics tools and resources to p …
The SH2-binding phosphotyrosine class of short linear motifs (SLiMs) are key conditional regulatory elements, particularly in signali …
398,911 results
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