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Year Number of Results
1999 1
2000 4
2001 4
2002 3
2003 5
2004 1
2005 2
2006 6
2007 6
2008 10
2009 4
2010 7
2011 8
2012 16
2013 16
2014 8
2015 14
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2017 16
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2019 22
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2021 20
2022 20
2023 28
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322 results

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Page 1
A genome-scale phylogeny of the kingdom Fungi.
Li Y, Steenwyk JL, Chang Y, Wang Y, James TY, Stajich JE, Spatafora JW, Groenewald M, Dunn CW, Hittinger CT, Shen XX, Rokas A. Li Y, et al. Among authors: rokas a. Curr Biol. 2021 Apr 26;31(8):1653-1665.e5. doi: 10.1016/j.cub.2021.01.074. Epub 2021 Feb 18. Curr Biol. 2021. PMID: 33607033 Free PMC article.
Mammalian pregnancy.
Abbot P, Rokas A. Abbot P, et al. Among authors: rokas a. Curr Biol. 2017 Feb 20;27(4):R127-R128. doi: 10.1016/j.cub.2016.10.046. Curr Biol. 2017. PMID: 28222284 Free article.
Evolutionary origin and population diversity of a cryptic hybrid pathogen.
Steenwyk JL, Knowles S, Bastos RW, Balamurugan C, Rinker D, Mead ME, Roberts CD, Raja HA, Li Y, Colabardini AC, de Castro PA, Dos Reis TF, Gumilang A, Almagro-Molto M, Alanio A, Garcia-Hermoso D, Delbaje E, Pontes L, Pinzan CF, Schreiber AZ, Canóvas D, Sanchez Luperini R, Lagrou K, Torrado E, Rodrigues F, Oberlies NH, Zhou X, Goldman GH, Rokas A. Steenwyk JL, et al. Among authors: rokas a. Nat Commun. 2024 Sep 28;15(1):8412. doi: 10.1038/s41467-024-52639-1. Nat Commun. 2024. PMID: 39333551 Free PMC article.
A genome-informed higher rank classification of the biotechnologically important fungal subphylum Saccharomycotina.
Groenewald M, Hittinger CT, Bensch K, Opulente DA, Shen XX, Li Y, Liu C, LaBella AL, Zhou X, Limtong S, Jindamorakot S, Gonçalves P, Robert V, Wolfe KH, Rosa CA, Boekhout T, Čadež N, Éter G, Sampaio JP, Lachance MA, Yurkov AM, Daniel HM, Takashima M, Boundy-Mills K, Libkind D, Aoki K, Sugita T, Rokas A. Groenewald M, et al. Among authors: rokas a. Stud Mycol. 2023 Jun;105:1-22. doi: 10.3114/sim.2023.105.01. Epub 2023 May 25. Stud Mycol. 2023. PMID: 38895705 Free PMC article.
The Paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes.
Floudas D, Binder M, Riley R, Barry K, Blanchette RA, Henrissat B, Martínez AT, Otillar R, Spatafora JW, Yadav JS, Aerts A, Benoit I, Boyd A, Carlson A, Copeland A, Coutinho PM, de Vries RP, Ferreira P, Findley K, Foster B, Gaskell J, Glotzer D, Górecki P, Heitman J, Hesse C, Hori C, Igarashi K, Jurgens JA, Kallen N, Kersten P, Kohler A, Kües U, Kumar TK, Kuo A, LaButti K, Larrondo LF, Lindquist E, Ling A, Lombard V, Lucas S, Lundell T, Martin R, McLaughlin DJ, Morgenstern I, Morin E, Murat C, Nagy LG, Nolan M, Ohm RA, Patyshakuliyeva A, Rokas A, Ruiz-Dueñas FJ, Sabat G, Salamov A, Samejima M, Schmutz J, Slot JC, St John F, Stenlid J, Sun H, Sun S, Syed K, Tsang A, Wiebenga A, Young D, Pisabarro A, Eastwood DC, Martin F, Cullen D, Grigoriev IV, Hibbett DS. Floudas D, et al. Among authors: rokas a. Science. 2012 Jun 29;336(6089):1715-9. doi: 10.1126/science.1221748. Science. 2012. PMID: 22745431 Free article.
Running a genetic stop sign accelerates oxygen metabolism and energy production in horses.
Castiglione GM, Chen X, Xu Z, Dbouk NH, Bose AA, Carmona-Berrio D, Chi EE, Zhou L, Boronina TN, Cole RN, Wu S, Liu AD, Liu TD, Lu H, Kalbfleisch T, Rinker D, Rokas A, Ortved K, Duh EJ. Castiglione GM, et al. Among authors: rokas a. Science. 2025 Mar 28;387(6741):eadr8589. doi: 10.1126/science.adr8589. Epub 2025 Mar 28. Science. 2025. PMID: 40146832
Aspergillus fumigatus conidial surface-associated proteome reveals factors for fungal evasion and host immunity modulation.
Pinzan CF, Valero C, de Castro PA, da Silva JL, Earle K, Liu H, Horta MAC, Kniemeyer O, Krüger T, Pschibul A, Cömert DN, Heinekamp T, Brakhage AA, Steenwyk JL, Mead ME, Hermsdorf N, Filler SG, da Rosa-Garzon NG, Delbaje E, Bromley MJ, Cabral H, Diehl C, Angeli CB, Palmisano G, Ibrahim AS, Rinker DC, Sauters TJC, Steffen K, Gumilang A, Rokas A, Gago S, Dos Reis TF, Goldman GH. Pinzan CF, et al. Among authors: rokas a. Nat Microbiol. 2024 Oct;9(10):2710-2726. doi: 10.1038/s41564-024-01782-y. Epub 2024 Aug 27. Nat Microbiol. 2024. PMID: 39191887 Free PMC article.
PhyKIT: A Multitool for Phylogenomics.
Steenwyk JL, Martínez-Redondo GI, Buida TJ 3rd, Gluck-Thaler E, Shen XX, Gabaldón T, Rokas A, Fernández R. Steenwyk JL, et al. Among authors: rokas a. Curr Protoc. 2024 Nov;4(11):e70016. doi: 10.1002/cpz1.70016. Curr Protoc. 2024. PMID: 39475193
322 results