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Computing Phylo- k-Mers.
Romashchenko N, Linard B, Rivals E, Pardi F. Romashchenko N, et al. IEEE/ACM Trans Comput Biol Bioinform. 2023 Sep-Oct;20(5):2889-2897. doi: 10.1109/TCBB.2023.3278049. Epub 2023 Oct 9. IEEE/ACM Trans Comput Biol Bioinform. 2023. PMID: 37204943
Quest for Orthologs in the era of Data Deluge and AI: Challenges and Innovations in Orthology Prediction and Data Integration.
Majidian S, Hadziahmetovic A, Langschied F, Pascarelli S, Prieto-Baños S, Rojas-Vargas J; Quest for Orthologs Consortium; Braun EL, Dessimoz C, Diallo AB, Durand D, Fang G, Gabaldón T, Glover N, Liberles DA, McWhite C, Sonnhammer ELL, Thomas PD, Ouangraoua A, Julca I. Majidian S, et al. J Mol Evol. 2025 Oct 14. doi: 10.1007/s00239-025-10272-6. Online ahead of print. J Mol Evol. 2025. PMID: 41085653 Review.