First cases of Omicron in France are exhibiting mild symptoms, November 2021-January 2022
Collaborators
-
A Andrieu 8 , O Broustal 9 , S Chene 10 , S Chent 11 , E Fougère 12 , G Gbaguidi 13 , M Hamidouche 14 , A Lamy 15 , Q Mano 16 , B Mastrovito 17 , A Mercier 18 , G Modenesi 19 , G Picard 20 , J Prudhomme 21 , F Rapilly 22 , A Riondel 23 , M Rivière 24 , B Villegas Ramirez 25 , A Zhu-Soubise 26 , M Zurbaran 27 , A Amzert 28 , L Andreoletti 29 , A Bal 30 , R Beaurepere 31 , S Behillil 32 , L Belec 33 , C Bernard 34 , L Bocket 35 , L Bouri 36 , T Bourlet 37 , C Bressollette-Bodin 38 , S Brichler 39 , C Brugerolles 40 , S Cado 41 , V Calvez 42 , N Capron 43 , S Castelain 44 , J Castro-Alvarez 45 , M-L Chaix 46 , C Charpentier 47 , D Che 48 , C Chillou 49 , P Colson 50 , P Coudene 51 , A Crinquette 52 , A De Rougemont 53 , H Delagrèverie 54 , C Delamare 55 , T Denecker-Berardino 56 , D Descamps 57 , M Desroches 34 , G Destras 58 , G Dos Santos 59 , A Ducancelle 60 , S Ducreux 61 , T Duret 62 , V Enouf 63 , S Fafi-Kremer 64 , C Felici 65 , S Fourati 66 , P-E Fournier 67 , C Gaudy 68 , H Germain 69 , V Giordanengo 70 , O Gorge 71 , S Haim-Boukobza 72 , C Henquell 73 , A Holstein 74 , L Houhamdi 75 , J Izopet 76 , V Jacomo 77 , A Jacques 78 , M-C Jaffar-Bandjee 79 , M Jimenez 80 , L Josset 81 , S Kemeny 82 , M-E Lafon 83 , A Le Bars 84 , G Le Corguille 85 , Q Lepiller 86 , A Levasseur 87 , N Leveque 88 , B Lina 89 , C Madelaine 90 , C Malabat 91 , S Marque-Juillet 92 , T Martin-Dunavit 93 , P Mavingui 94 , A Merens 95 , I Messak 96 , L Morand-Joubert 97 , X Naudot 98 , P Neybecker 99 , J-M Pawlotsky 100 , L Pilorge 101 , J-C Plantier 102 , C Poggi 103 , M Pretet 104 , C Ragot 34 , H Raoul 105 , S Rogez 106 , A-M Roque-Afonso 107 , B Roquebert 108 , D Rousset 109 , F Rozenberg 110 , C Sagot 111 , S Sahnoune 112 , D Salgado 113 , O Sand 114 , C Saudemont 115 , E Schvoerer 116 , E Simon-Loriere 117 , R Stephan 118 , J Sudour 119 , V Thibault 120 , E Tuaillon 121 , A Vabret 122 , E Vallee 123 , S Van Der Werf 124 , J Van Helden 125 , L Verdurme 126 , A Vignola 127 , D Wilkinson 128 , Y Yazdanpanah 129
Affiliations
- 1 Santé publique France, Saint-Maurice, France. Electronic address: Anna.Maisa@santepubliquefrance.fr.
- 2 Santé publique France, Saint-Maurice, France. Electronic address: guillaume.spaccaferri@santepubliquefrance.fr.
- 3 Santé publique France, Saint-Maurice, France. Electronic address: Lucie.FOURNIER@santepubliquefrance.fr.
- 4 Santé publique France, Saint-Maurice, France. Electronic address: Justine.SCHAEFFER@santepubliquefrance.fr.
- 5 Santé publique France, Saint-Maurice, France. Electronic address: joel.deniau@santepubliquefrance.fr.
- 6 Santé publique France, Saint-Maurice, France. Electronic address: Patrick.ROLLAND@santepubliquefrance.fr.
- 7 Santé publique France, Saint-Maurice, France. Electronic address: Bruno.COIGNARD@santepubliquefrance.fr.
- 8 Santé publique France, Cayenne, France. Electronic address: audrey.andrieu@santepubliquefrance.fr.
- 9 Santé publique France, Nancy, France. Electronic address: oriane.broustal@santepunliquefrance.fr.
- 10 Santé publique France, Dijon, France. Electronic address: sonia.chene@santepubliquefrance.fr.
- 11 Santé publique France, Lille, France. Electronic address: Souhaila.CHENT@santepubliquefrance.fr.
- 12 Santé publique France, Lyon, France. Electronic address: erica.fourgere@santepubliquefrance.fr.
- 13 Santé publique France, Fort-de-France, France. Electronic address: GwladysNadia.GBAGUIDI@santepubliquefrance.fr.
- 14 Santé publique France, Saint-Denis, France. Electronic address: Mohamed.HAMIDOUCHE@santepubliquefrance.fr.
- 15 Santé publique France, Bordeaux, France. Electronic address: Anais.lamy@santepubliquefrance.fr.
- 16 Santé publique France, Ajaccio, France. Electronic address: mano.quiterie@santepubliquefrance.fr.
- 17 Santé publique France, Rouen, France. Electronic address: Brice.MASTROVITO@santepubliquefrance.fr.
- 18 Santé publique France, Saint-Denis, La Réunion. Electronic address: Alize.MERCIER@santepubliquefrance.fr.
- 19 Santé publique France, Saint-Denis, France. Electronic address: Gabriella.MODENESI@santepubliquefrance.fr.
- 20 Santé publique France, Rennes, France. Electronic address: Gwenola.PICARD@santepubliquefrance.fr.
- 21 Santé publique France, Nantes, France. Electronic address: Julie.PRUDHOMME@santepubliquefrance.fr.
- 22 Santé publique France, Marseille, France. Electronic address: florence.rapilly@santepubliquefrance.fr.
- 23 Santé publique France, Marseille, France. Electronic address: adeline.riondel@santepubliquefrance.fr.
- 24 Santé publique France, Orléans, France. Electronic address: Mathieu.RIVIERE@santepubliquefrance.fr.
- 25 Santé publique France, Saint-Denis, France. Electronic address: Berenice.VILLEGASRAMIREZ@santepubliquefrance.fr.
- 26 Santé publique France, Saint-Denis, France. Electronic address: aurelien.ZHU-SOUBISE@santepubliquefrance.fr.
- 27 Agence régionale de Santé, Île-de-France, Saint-Denis, France. Electronic address: manuel.zurbaran@ars.sante.gouv.fr.
- 28 Inserm, Paris, France. Electronic address: abdelkader.amzert@inserm.eu.
- 29 Faculté de Médecine URCA, CHU Reims, Reims, France. Electronic address: landreoletti@chu-reims.fr.
- 30 CNR Virus des infections respiratoires, Hospices Civils de Lyon, Lyon, France. Electronic address: antonin.bal@chu-lyon.fr.
- 31 ANRS Maladies infectieuses émergentes, Paris, France. Electronic address: romane.beaurepere@anrs.fr.
- 32 CNR Virus des infections respiratoires, Institut Pasteur, Paris, France. Electronic address: sylvie.behillil@pasteur.fr.
- 33 APHP Hôpital Européen Georges-Pompidou, Paris, France. Electronic address: laurent.belec@aphp.fr.
- 34 HIA Percy, Clamart, France.
- 35 CHU Lille, Lille, France. Electronic address: Laurence.BOCKET@chru-lille.fr.
- 36 Institut Français de BioInformatique, Illkirch-Graffenstaden, France. Electronic address: bouril@igbmc.fr.
- 37 CHU Saint-Etienne, Saint-Etienne, France. Electronic address: thomas.bourlet@chu-st-etienne.fr.
- 38 CHU Nantes, Nantes, France. Electronic address: celine.bressollette@chu-nantes.fr.
- 39 APHP Avicenne, Bobigny, France. Electronic address: segolene.brichler@aphp.fr.
- 40 ANRS, Inserm, Paris, France. Electronic address: claire.brugerolles@inserm.fr.
- 41 Cerba, Cerballiance, Saint-Ouen L'Aumône, France. Electronic address: scado@lab-cerba.com.
- 42 APHP Pitié-Salpêtrière, Paris, France. Electronic address: vincent.calvez@aphp.fr.
- 43 Biopath, Coquelles, France. Electronic address: nicolas.capron@biopath.fr.
- 44 CHU Amiens, Amiens, France. Electronic address: Castelain.Sandrine@chu-amiens.fr.
- 45 APHP Saint-Louis, Paris, France. Electronic address: Javier.CASTRO-ALVAREZ@santepubliquefrance.fr.
- 46 APHP Bichat-Claude Bernard, Paris, France. Electronic address: marie-laure.chaix@aphp.fr.
- 47 Laborizon Centre Biogroup, Chambray-les-Tours, France. Electronic address: charlotte.charpentier@aphp.fr.
- 48 APHP Saint-Louis, Paris, France. Electronic address: Didier.CHE@santepubliquefrance.fr.
- 49 CNR-LE Appui au séquençage du SARS-CoV-2, APHM, Marseille, France. Electronic address: christian.chillou@biogroup.fr.
- 50 Lxbio, Montpellier, France. Electronic address: philippe.COLSON@univ-amu.fr.
- 51 CHU Dijon, Dijon, France. Electronic address: p.coudene@lxbio.com.
- 52 Biopath, Coquelles, France. Electronic address: antoine.crinquette@biopath.fr.
- 53 CHU Metz, Metz, France. Electronic address: alexis.de-rougemont@chu-dijon.fr.
- 54 APHP Avicenne, Bobigny, France. Electronic address: heloise.delagreverie@aphp.fr.
- 55 Institut Français de BioInformatique, Paris, France. Electronic address: c.delamare@chr-metz-thionville.fr.
- 56 CHU Martinique, Fort-de-France, Martinique. Electronic address: thomas.denecker@france-bioinformatique.fr.
- 57 APHP Bichat-Claude Bernard, Paris, France. Electronic address: diane.descamps@aphp.fr.
- 58 CNR Virus des infections respiratoires, Hospices Civils de Lyon, Lyon, France. Electronic address: gregory.destras@chu-lyon.fr.
- 59 CHU Angers, Angers, France. Electronic address: georges.dos-santos@chu-fortdefrance.fr.
- 60 Alpigene Synlab, Lyon, France. Electronic address: AlDucancelle@chu-angers.fr.
- 61 Genbio, Inovie, Clermont-Ferrand, France. Electronic address: stephanie.ducreux@labo-alpigene.fr.
- 62 CHU Strasbourg, Strasbourg, France. Electronic address: thomas.duret@genbio.fr.
- 63 CNR Virus des infections respiratoires, Institut Pasteur, Paris, France. Electronic address: vincent.enouf@pasteur.fr.
- 64 Espacebio, Metz, France. Electronic address: samira.fafi-kremer@chru-strasbourg.fr.
- 65 CNR-LE Appui au séquençage du SARS-CoV-2, APHP Henri Mondor, Créteil, France. Electronic address: c.felici@espacebio.fr.
- 66 CHU Tours, Tours, France. Electronic address: slim.fourati@aphp.fr.
- 67 Lxbio, Montpellier, France. Electronic address: pierre-edouard.fournier@univ-amu.fr.
- 68 Espacebio, Metz, France. Electronic address: gaudy_c@med.univ-tours.fr.
- 69 Atoutbio, Paris, France. Electronic address: hugo.germain@atoutbio.eu.
- 70 CHU Nice, Nice, France. Electronic address: giordanengo.v@chu-nice.fr.
- 71 IRBA, Bretrigny sur Orge, France. Electronic address: olivier.gorge@intradef.gouv.fr.
- 72 Cerba, Cerballiance, Saint-Ouen L'Aumône, France. Electronic address: Stephanie.Haim-Boukobza@lab-cerba.com.
- 73 CHU Clermont-Ferrand, Clermont-Ferrand, France. Electronic address: chenquell@chu-clermontferrand.fr.
- 74 CNR-LE Appui au séquençage du SARS-CoV-2, APHM, Marseille, France. Electronic address: anne.holstein@biogroup.fr.
- 75 Lxbio, Montpellier, France. Electronic address: linda.houhamdi@ap-hm.fr.
- 76 CHU Toulouse, Toulouse, France. Electronic address: izopet.j@chu-toulouse.fr.
- 77 Eurofin-Biomnis, Lyon, France. Electronic address: veroniquejacomo@eurofins-biomnis.com.
- 78 Biogroup, Metz, France. Electronic address: alexandra.jacques@biogroup.fr.
- 79 CHU La Réunion, Saint-Denis, La Réunion. Electronic address: marie-christine.jaffarbandjee@chu-reunion.fr.
- 80 CNR-LE Appui au séquençage du SARS-CoV-2, APHM, Marseille, France. Electronic address: melanie.jimenez@biogroup.fr.
- 81 CNR Virus des infections respiratoires, Hospices Civils de Lyon, Lyon, France. Electronic address: laurence.josset@chu-lyon.fr.
- 82 CHU Strasbourg, Strasbourg, France. Electronic address: stephan.kemeny@genbio.fr.
- 83 CHU Bordeaux, Bordeaux, France. Electronic address: marie-edith.lafon@chu-bordeaux.fr.
- 84 Institut Français de BioInformatique, Roscoff, France. Electronic address: arthur.le-bars@france-bioinformatique.fr.
- 85 Institut Français de BioInformatique, Roscoff, France. Electronic address: lecorguille@sb-roscoff.fr.
- 86 CHU Besançon, Besançon, France. Electronic address: q1lepiller@chu-besancon.fr.
- 87 Lxbio, Montpellier, France. Electronic address: anthony.levasseur@univ-amu.fr.
- 88 CHU Poitiers, Poitiers, France. Electronic address: nicolas.leveque@chu-poitiers.fr.
- 89 CNR Virus des infections respiratoires, Hospices Civils de Lyon, Lyon, France. Electronic address: bruno.lina@chu-lyon.fr.
- 90 ANRS, Inserm, Paris, France. Electronic address: claire.madelaine@inserm.fr.
- 91 Institut Pasteur, Paris, France. Electronic address: christophe.malabat@pasteur.fr.
- 92 CH Versailles, Versailles, France. Electronic address: smarquejuillet@ch-versailles.fr.
- 93 Genbio, Inovie, Clermont-Ferrand, France. Electronic address: tanguy.martin-denavit@labo-alpigene.fr.
- 94 PIMIT La Réunion, Sainte-Clotilde, La Réunion. Electronic address: patrick.mavingui@cnrs.fr.
- 95 HIA Bégin, Saint Mandé, France. Electronic address: audrey.merens@intradef.gouv.fr.
- 96 Institut Français de BioInformatique, Paris, France. Electronic address: imane.messak@france-bioinformatique.fr.
- 97 APHP Saint Antoine, Paris, France. Electronic address: laurence.morand-joubert@aphp.fr.
- 98 Eurofin-Biomnis, Lyon, France. Electronic address: xaviernaudot@eurofins-biomnis.com.
- 99 Atoutbio, Paris, France. Electronic address: paul.neybecker@atoutbio.eu.
- 100 CHU Tours, Tours, France. Electronic address: jean-michel.pawlotsky@aphp.fr.
- 101 CHU Brest, Brest, France. Electronic address: lea.pilorge@chu-brest.fr.
- 102 CHU Rouen, Rouen, France. Electronic address: jean-Christophe.Plantier@chu-rouen.fr.
- 103 CH Toulon, Toulon, France. Electronic address: cecile.poggi@ch-toulon.fr.
- 104 APHP Saint-Louis, Paris, France. Electronic address: mael.pretet@santepubliquefrance.fr.
- 105 ANRS Maladies infectieuses émergentes, Paris, France. Electronic address: herve.raoul@inserm.fr.
- 106 CHU Limoges, Limoges, France. Electronic address: s.rogez@unilim.fr.
- 107 APHP Paul Brousse, Villejuif, France. Electronic address: anne-marie.roque@aphp.fr.
- 108 Cerba, Cerballiance, Saint-Ouen L'Aumône, France. Electronic address: benedicte.roquebert@lab-cerba.com.
- 109 Institut Pasteur Guyane, Cayenne, Guyane. Electronic address: drousset@pasteur-cayenne.fr.
- 110 APHP Cochin, Paris, France. Electronic address: flore.rozenberg@aphp.fr.
- 111 Biopath, Coquelles, France. Electronic address: christophe.sagot@biopath.fr.
- 112 Inserm, Paris, France. Electronic address: sammy.sahnoune@inserm.eu.
- 113 Institut Français de BioInformatique, Marseille, France. Electronic address: david.salgado@univ-amu.fr.
- 114 Institut Français de BioInformatique, Lille, France. Electronic address: Olivier.SAND@cnrs.fr.
- 115 Eurofin-Biomnis, Lyon, France. Electronic address: camillesaudemont@eurofins-biomnis.com.
- 116 CHU Nancy, Nancy, France. Electronic address: e.schvoerer@chu-nancy.fr.
- 117 Institut Pasteur, Paris, France. Electronic address: etienne.simon-loriere@pasteur.fr.
- 118 CHU Nîmes, Nîmes, France. Electronic address: robin.stephan@chu-nimes.fr.
- 119 APHP Saint-Louis, Paris, France. Electronic address: Jeanne.SUDOUR@santepubliquefrance.fr.
- 120 CHU Rennes, Rennes, France. Electronic address: vincent.thibault@chu-rennes.fr.
- 121 CHU Montpellier, Montpellier, France. Electronic address: e-tuaillon@chu-montpellier.fr.
- 122 CHU Caen, Caen, France. Electronic address: vabret-a@chu-caen.fr.
- 123 CH Simone Veil, Eaubonne, France. Electronic address: eric.vallee@ch-simoneveil.fr.
- 124 CNR Virus des infections respiratoires, Institut Pasteur, Paris, France. Electronic address: sylvie.van-der-werf@pasteur.fr.
- 125 Institut Français de BioInformatique, Marseille, France. Electronic address: jacques.van-helden@france-bioinformatique.fr.
- 126 Cerba, Cerballiance, Saint-Ouen L'Aumône, France. Electronic address: Laura.Verdurme@lab-cerba.com.
- 127 Oriade Noviale, Le Pont-de-Beauvoisin, France. Electronic address: alexandre.vignola@noviale.fr.
- 128 PIMIT La Réunion, Sainte-Clotilde, La Réunion. Electronic address: david.wilkinson@univ-reunion.fr.
- 129 ANRS Maladies infectieuses émergentes, Paris, France. Electronic address: yazdan.yazdanpanah@aphp.fr.
- PMID: 35167979
- PMCID: PMC9194534
- DOI: 10.1016/j.idnow.2022.02.003
First cases of Omicron in France are exhibiting mild symptoms, November 2021-January 2022
Authors
Collaborators
-
A Andrieu 8 , O Broustal 9 , S Chene 10 , S Chent 11 , E Fougère 12 , G Gbaguidi 13 , M Hamidouche 14 , A Lamy 15 , Q Mano 16 , B Mastrovito 17 , A Mercier 18 , G Modenesi 19 , G Picard 20 , J Prudhomme 21 , F Rapilly 22 , A Riondel 23 , M Rivière 24 , B Villegas Ramirez 25 , A Zhu-Soubise 26 , M Zurbaran 27 , A Amzert 28 , L Andreoletti 29 , A Bal 30 , R Beaurepere 31 , S Behillil 32 , L Belec 33 , C Bernard 34 , L Bocket 35 , L Bouri 36 , T Bourlet 37 , C Bressollette-Bodin 38 , S Brichler 39 , C Brugerolles 40 , S Cado 41 , V Calvez 42 , N Capron 43 , S Castelain 44 , J Castro-Alvarez 45 , M-L Chaix 46 , C Charpentier 47 , D Che 48 , C Chillou 49 , P Colson 50 , P Coudene 51 , A Crinquette 52 , A De Rougemont 53 , H Delagrèverie 54 , C Delamare 55 , T Denecker-Berardino 56 , D Descamps 57 , M Desroches 34 , G Destras 58 , G Dos Santos 59 , A Ducancelle 60 , S Ducreux 61 , T Duret 62 , V Enouf 63 , S Fafi-Kremer 64 , C Felici 65 , S Fourati 66 , P-E Fournier 67 , C Gaudy 68 , H Germain 69 , V Giordanengo 70 , O Gorge 71 , S Haim-Boukobza 72 , C Henquell 73 , A Holstein 74 , L Houhamdi 75 , J Izopet 76 , V Jacomo 77 , A Jacques 78 , M-C Jaffar-Bandjee 79 , M Jimenez 80 , L Josset 81 , S Kemeny 82 , M-E Lafon 83 , A Le Bars 84 , G Le Corguille 85 , Q Lepiller 86 , A Levasseur 87 , N Leveque 88 , B Lina 89 , C Madelaine 90 , C Malabat 91 , S Marque-Juillet 92 , T Martin-Dunavit 93 , P Mavingui 94 , A Merens 95 , I Messak 96 , L Morand-Joubert 97 , X Naudot 98 , P Neybecker 99 , J-M Pawlotsky 100 , L Pilorge 101 , J-C Plantier 102 , C Poggi 103 , M Pretet 104 , C Ragot 34 , H Raoul 105 , S Rogez 106 , A-M Roque-Afonso 107 , B Roquebert 108 , D Rousset 109 , F Rozenberg 110 , C Sagot 111 , S Sahnoune 112 , D Salgado 113 , O Sand 114 , C Saudemont 115 , E Schvoerer 116 , E Simon-Loriere 117 , R Stephan 118 , J Sudour 119 , V Thibault 120 , E Tuaillon 121 , A Vabret 122 , E Vallee 123 , S Van Der Werf 124 , J Van Helden 125 , L Verdurme 126 , A Vignola 127 , D Wilkinson 128 , Y Yazdanpanah 129
Affiliations
- 1 Santé publique France, Saint-Maurice, France. Electronic address: Anna.Maisa@santepubliquefrance.fr.
- 2 Santé publique France, Saint-Maurice, France. Electronic address: guillaume.spaccaferri@santepubliquefrance.fr.
- 3 Santé publique France, Saint-Maurice, France. Electronic address: Lucie.FOURNIER@santepubliquefrance.fr.
- 4 Santé publique France, Saint-Maurice, France. Electronic address: Justine.SCHAEFFER@santepubliquefrance.fr.
- 5 Santé publique France, Saint-Maurice, France. Electronic address: joel.deniau@santepubliquefrance.fr.
- 6 Santé publique France, Saint-Maurice, France. Electronic address: Patrick.ROLLAND@santepubliquefrance.fr.
- 7 Santé publique France, Saint-Maurice, France. Electronic address: Bruno.COIGNARD@santepubliquefrance.fr.
- 8 Santé publique France, Cayenne, France. Electronic address: audrey.andrieu@santepubliquefrance.fr.
- 9 Santé publique France, Nancy, France. Electronic address: oriane.broustal@santepunliquefrance.fr.
- 10 Santé publique France, Dijon, France. Electronic address: sonia.chene@santepubliquefrance.fr.
- 11 Santé publique France, Lille, France. Electronic address: Souhaila.CHENT@santepubliquefrance.fr.
- 12 Santé publique France, Lyon, France. Electronic address: erica.fourgere@santepubliquefrance.fr.
- 13 Santé publique France, Fort-de-France, France. Electronic address: GwladysNadia.GBAGUIDI@santepubliquefrance.fr.
- 14 Santé publique France, Saint-Denis, France. Electronic address: Mohamed.HAMIDOUCHE@santepubliquefrance.fr.
- 15 Santé publique France, Bordeaux, France. Electronic address: Anais.lamy@santepubliquefrance.fr.
- 16 Santé publique France, Ajaccio, France. Electronic address: mano.quiterie@santepubliquefrance.fr.
- 17 Santé publique France, Rouen, France. Electronic address: Brice.MASTROVITO@santepubliquefrance.fr.
- 18 Santé publique France, Saint-Denis, La Réunion. Electronic address: Alize.MERCIER@santepubliquefrance.fr.
- 19 Santé publique France, Saint-Denis, France. Electronic address: Gabriella.MODENESI@santepubliquefrance.fr.
- 20 Santé publique France, Rennes, France. Electronic address: Gwenola.PICARD@santepubliquefrance.fr.
- 21 Santé publique France, Nantes, France. Electronic address: Julie.PRUDHOMME@santepubliquefrance.fr.
- 22 Santé publique France, Marseille, France. Electronic address: florence.rapilly@santepubliquefrance.fr.
- 23 Santé publique France, Marseille, France. Electronic address: adeline.riondel@santepubliquefrance.fr.
- 24 Santé publique France, Orléans, France. Electronic address: Mathieu.RIVIERE@santepubliquefrance.fr.
- 25 Santé publique France, Saint-Denis, France. Electronic address: Berenice.VILLEGASRAMIREZ@santepubliquefrance.fr.
- 26 Santé publique France, Saint-Denis, France. Electronic address: aurelien.ZHU-SOUBISE@santepubliquefrance.fr.
- 27 Agence régionale de Santé, Île-de-France, Saint-Denis, France. Electronic address: manuel.zurbaran@ars.sante.gouv.fr.
- 28 Inserm, Paris, France. Electronic address: abdelkader.amzert@inserm.eu.
- 29 Faculté de Médecine URCA, CHU Reims, Reims, France. Electronic address: landreoletti@chu-reims.fr.
- 30 CNR Virus des infections respiratoires, Hospices Civils de Lyon, Lyon, France. Electronic address: antonin.bal@chu-lyon.fr.
- 31 ANRS Maladies infectieuses émergentes, Paris, France. Electronic address: romane.beaurepere@anrs.fr.
- 32 CNR Virus des infections respiratoires, Institut Pasteur, Paris, France. Electronic address: sylvie.behillil@pasteur.fr.
- 33 APHP Hôpital Européen Georges-Pompidou, Paris, France. Electronic address: laurent.belec@aphp.fr.
- 34 HIA Percy, Clamart, France.
- 35 CHU Lille, Lille, France. Electronic address: Laurence.BOCKET@chru-lille.fr.
- 36 Institut Français de BioInformatique, Illkirch-Graffenstaden, France. Electronic address: bouril@igbmc.fr.
- 37 CHU Saint-Etienne, Saint-Etienne, France. Electronic address: thomas.bourlet@chu-st-etienne.fr.
- 38 CHU Nantes, Nantes, France. Electronic address: celine.bressollette@chu-nantes.fr.
- 39 APHP Avicenne, Bobigny, France. Electronic address: segolene.brichler@aphp.fr.
- 40 ANRS, Inserm, Paris, France. Electronic address: claire.brugerolles@inserm.fr.
- 41 Cerba, Cerballiance, Saint-Ouen L'Aumône, France. Electronic address: scado@lab-cerba.com.
- 42 APHP Pitié-Salpêtrière, Paris, France. Electronic address: vincent.calvez@aphp.fr.
- 43 Biopath, Coquelles, France. Electronic address: nicolas.capron@biopath.fr.
- 44 CHU Amiens, Amiens, France. Electronic address: Castelain.Sandrine@chu-amiens.fr.
- 45 APHP Saint-Louis, Paris, France. Electronic address: Javier.CASTRO-ALVAREZ@santepubliquefrance.fr.
- 46 APHP Bichat-Claude Bernard, Paris, France. Electronic address: marie-laure.chaix@aphp.fr.
- 47 Laborizon Centre Biogroup, Chambray-les-Tours, France. Electronic address: charlotte.charpentier@aphp.fr.
- 48 APHP Saint-Louis, Paris, France. Electronic address: Didier.CHE@santepubliquefrance.fr.
- 49 CNR-LE Appui au séquençage du SARS-CoV-2, APHM, Marseille, France. Electronic address: christian.chillou@biogroup.fr.
- 50 Lxbio, Montpellier, France. Electronic address: philippe.COLSON@univ-amu.fr.
- 51 CHU Dijon, Dijon, France. Electronic address: p.coudene@lxbio.com.
- 52 Biopath, Coquelles, France. Electronic address: antoine.crinquette@biopath.fr.
- 53 CHU Metz, Metz, France. Electronic address: alexis.de-rougemont@chu-dijon.fr.
- 54 APHP Avicenne, Bobigny, France. Electronic address: heloise.delagreverie@aphp.fr.
- 55 Institut Français de BioInformatique, Paris, France. Electronic address: c.delamare@chr-metz-thionville.fr.
- 56 CHU Martinique, Fort-de-France, Martinique. Electronic address: thomas.denecker@france-bioinformatique.fr.
- 57 APHP Bichat-Claude Bernard, Paris, France. Electronic address: diane.descamps@aphp.fr.
- 58 CNR Virus des infections respiratoires, Hospices Civils de Lyon, Lyon, France. Electronic address: gregory.destras@chu-lyon.fr.
- 59 CHU Angers, Angers, France. Electronic address: georges.dos-santos@chu-fortdefrance.fr.
- 60 Alpigene Synlab, Lyon, France. Electronic address: AlDucancelle@chu-angers.fr.
- 61 Genbio, Inovie, Clermont-Ferrand, France. Electronic address: stephanie.ducreux@labo-alpigene.fr.
- 62 CHU Strasbourg, Strasbourg, France. Electronic address: thomas.duret@genbio.fr.
- 63 CNR Virus des infections respiratoires, Institut Pasteur, Paris, France. Electronic address: vincent.enouf@pasteur.fr.
- 64 Espacebio, Metz, France. Electronic address: samira.fafi-kremer@chru-strasbourg.fr.
- 65 CNR-LE Appui au séquençage du SARS-CoV-2, APHP Henri Mondor, Créteil, France. Electronic address: c.felici@espacebio.fr.
- 66 CHU Tours, Tours, France. Electronic address: slim.fourati@aphp.fr.
- 67 Lxbio, Montpellier, France. Electronic address: pierre-edouard.fournier@univ-amu.fr.
- 68 Espacebio, Metz, France. Electronic address: gaudy_c@med.univ-tours.fr.
- 69 Atoutbio, Paris, France. Electronic address: hugo.germain@atoutbio.eu.
- 70 CHU Nice, Nice, France. Electronic address: giordanengo.v@chu-nice.fr.
- 71 IRBA, Bretrigny sur Orge, France. Electronic address: olivier.gorge@intradef.gouv.fr.
- 72 Cerba, Cerballiance, Saint-Ouen L'Aumône, France. Electronic address: Stephanie.Haim-Boukobza@lab-cerba.com.
- 73 CHU Clermont-Ferrand, Clermont-Ferrand, France. Electronic address: chenquell@chu-clermontferrand.fr.
- 74 CNR-LE Appui au séquençage du SARS-CoV-2, APHM, Marseille, France. Electronic address: anne.holstein@biogroup.fr.
- 75 Lxbio, Montpellier, France. Electronic address: linda.houhamdi@ap-hm.fr.
- 76 CHU Toulouse, Toulouse, France. Electronic address: izopet.j@chu-toulouse.fr.
- 77 Eurofin-Biomnis, Lyon, France. Electronic address: veroniquejacomo@eurofins-biomnis.com.
- 78 Biogroup, Metz, France. Electronic address: alexandra.jacques@biogroup.fr.
- 79 CHU La Réunion, Saint-Denis, La Réunion. Electronic address: marie-christine.jaffarbandjee@chu-reunion.fr.
- 80 CNR-LE Appui au séquençage du SARS-CoV-2, APHM, Marseille, France. Electronic address: melanie.jimenez@biogroup.fr.
- 81 CNR Virus des infections respiratoires, Hospices Civils de Lyon, Lyon, France. Electronic address: laurence.josset@chu-lyon.fr.
- 82 CHU Strasbourg, Strasbourg, France. Electronic address: stephan.kemeny@genbio.fr.
- 83 CHU Bordeaux, Bordeaux, France. Electronic address: marie-edith.lafon@chu-bordeaux.fr.
- 84 Institut Français de BioInformatique, Roscoff, France. Electronic address: arthur.le-bars@france-bioinformatique.fr.
- 85 Institut Français de BioInformatique, Roscoff, France. Electronic address: lecorguille@sb-roscoff.fr.
- 86 CHU Besançon, Besançon, France. Electronic address: q1lepiller@chu-besancon.fr.
- 87 Lxbio, Montpellier, France. Electronic address: anthony.levasseur@univ-amu.fr.
- 88 CHU Poitiers, Poitiers, France. Electronic address: nicolas.leveque@chu-poitiers.fr.
- 89 CNR Virus des infections respiratoires, Hospices Civils de Lyon, Lyon, France. Electronic address: bruno.lina@chu-lyon.fr.
- 90 ANRS, Inserm, Paris, France. Electronic address: claire.madelaine@inserm.fr.
- 91 Institut Pasteur, Paris, France. Electronic address: christophe.malabat@pasteur.fr.
- 92 CH Versailles, Versailles, France. Electronic address: smarquejuillet@ch-versailles.fr.
- 93 Genbio, Inovie, Clermont-Ferrand, France. Electronic address: tanguy.martin-denavit@labo-alpigene.fr.
- 94 PIMIT La Réunion, Sainte-Clotilde, La Réunion. Electronic address: patrick.mavingui@cnrs.fr.
- 95 HIA Bégin, Saint Mandé, France. Electronic address: audrey.merens@intradef.gouv.fr.
- 96 Institut Français de BioInformatique, Paris, France. Electronic address: imane.messak@france-bioinformatique.fr.
- 97 APHP Saint Antoine, Paris, France. Electronic address: laurence.morand-joubert@aphp.fr.
- 98 Eurofin-Biomnis, Lyon, France. Electronic address: xaviernaudot@eurofins-biomnis.com.
- 99 Atoutbio, Paris, France. Electronic address: paul.neybecker@atoutbio.eu.
- 100 CHU Tours, Tours, France. Electronic address: jean-michel.pawlotsky@aphp.fr.
- 101 CHU Brest, Brest, France. Electronic address: lea.pilorge@chu-brest.fr.
- 102 CHU Rouen, Rouen, France. Electronic address: jean-Christophe.Plantier@chu-rouen.fr.
- 103 CH Toulon, Toulon, France. Electronic address: cecile.poggi@ch-toulon.fr.
- 104 APHP Saint-Louis, Paris, France. Electronic address: mael.pretet@santepubliquefrance.fr.
- 105 ANRS Maladies infectieuses émergentes, Paris, France. Electronic address: herve.raoul@inserm.fr.
- 106 CHU Limoges, Limoges, France. Electronic address: s.rogez@unilim.fr.
- 107 APHP Paul Brousse, Villejuif, France. Electronic address: anne-marie.roque@aphp.fr.
- 108 Cerba, Cerballiance, Saint-Ouen L'Aumône, France. Electronic address: benedicte.roquebert@lab-cerba.com.
- 109 Institut Pasteur Guyane, Cayenne, Guyane. Electronic address: drousset@pasteur-cayenne.fr.
- 110 APHP Cochin, Paris, France. Electronic address: flore.rozenberg@aphp.fr.
- 111 Biopath, Coquelles, France. Electronic address: christophe.sagot@biopath.fr.
- 112 Inserm, Paris, France. Electronic address: sammy.sahnoune@inserm.eu.
- 113 Institut Français de BioInformatique, Marseille, France. Electronic address: david.salgado@univ-amu.fr.
- 114 Institut Français de BioInformatique, Lille, France. Electronic address: Olivier.SAND@cnrs.fr.
- 115 Eurofin-Biomnis, Lyon, France. Electronic address: camillesaudemont@eurofins-biomnis.com.
- 116 CHU Nancy, Nancy, France. Electronic address: e.schvoerer@chu-nancy.fr.
- 117 Institut Pasteur, Paris, France. Electronic address: etienne.simon-loriere@pasteur.fr.
- 118 CHU Nîmes, Nîmes, France. Electronic address: robin.stephan@chu-nimes.fr.
- 119 APHP Saint-Louis, Paris, France. Electronic address: Jeanne.SUDOUR@santepubliquefrance.fr.
- 120 CHU Rennes, Rennes, France. Electronic address: vincent.thibault@chu-rennes.fr.
- 121 CHU Montpellier, Montpellier, France. Electronic address: e-tuaillon@chu-montpellier.fr.
- 122 CHU Caen, Caen, France. Electronic address: vabret-a@chu-caen.fr.
- 123 CH Simone Veil, Eaubonne, France. Electronic address: eric.vallee@ch-simoneveil.fr.
- 124 CNR Virus des infections respiratoires, Institut Pasteur, Paris, France. Electronic address: sylvie.van-der-werf@pasteur.fr.
- 125 Institut Français de BioInformatique, Marseille, France. Electronic address: jacques.van-helden@france-bioinformatique.fr.
- 126 Cerba, Cerballiance, Saint-Ouen L'Aumône, France. Electronic address: Laura.Verdurme@lab-cerba.com.
- 127 Oriade Noviale, Le Pont-de-Beauvoisin, France. Electronic address: alexandre.vignola@noviale.fr.
- 128 PIMIT La Réunion, Sainte-Clotilde, La Réunion. Electronic address: david.wilkinson@univ-reunion.fr.
- 129 ANRS Maladies infectieuses émergentes, Paris, France. Electronic address: yazdan.yazdanpanah@aphp.fr.
- PMID: 35167979
- PMCID: PMC9194534
- DOI: 10.1016/j.idnow.2022.02.003
Abstract
Objectives: We aimed to investigate the first Omicron cases detected in France in order to assess case characteristics and provide supporting information on the possible impact of this variant on the healthcare system.
Methods: A standardized questionnaire was used to collect information from confirmed and probable Omicron cases.
Results: Median age of 468 investigated cases was 35 years, 376 were symptomatic (89%); 64% were vaccinated with two doses and 7% had received three doses. Loss of smell and taste were reported by 8.3% and 9% of cases, respectively. Seven cases were hospitalized, three of those were unvaccinated (including two with reported precondition). No admissions to intensive care and no deaths were reported.
Conclusions: Our results confirm a mild clinical presentation among the first Omicron cases detected in France and highlight the importance for the national COVID-19 surveillance system to quickly detect and adapt to the emergence of a new variant.
Keywords: COVID-19; Epidemiology; SARS-CoV-2; Signs and symptoms; Surveys and questionnaires.
Copyright © 2022 The Authors. Published by Elsevier Masson SAS.. All rights reserved.
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Number of investigated Omicron cases…
Fig. 1
Number of investigated Omicron cases and screening results for suspected Delta and Omicron.…

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Proportion of symptoms reported by…
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Proportion of symptoms reported by symptomatic cases ( n = 277). Multiple symptoms…
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