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Page 1
Highly accurate protein structure prediction with AlphaFold.
Jumper J, Evans R, Pritzel A, Green T, Figurnov M, Ronneberger O, Tunyasuvunakool K, Bates R, Žídek A, Potapenko A, Bridgland A, Meyer C, Kohl SAA, Ballard AJ, Cowie A, Romera-Paredes B, Nikolov S, Jain R, Adler J, Back T, Petersen S, Reiman D, Clancy E, Zielinski M, Steinegger M, Pacholska M, Berghammer T, Bodenstein S, Silver D, Vinyals O, Senior AW, Kavukcuoglu K, Kohli P, Hassabis D. Jumper J, et al. Among authors: senior aw. Nature. 2021 Aug;596(7873):583-589. doi: 10.1038/s41586-021-03819-2. Epub 2021 Jul 15. Nature. 2021. PMID: 34265844 Free PMC article.
Accurate proteome-wide missense variant effect prediction with AlphaMissense.
Cheng J, Novati G, Pan J, Bycroft C, Žemgulytė A, Applebaum T, Pritzel A, Wong LH, Zielinski M, Sargeant T, Schneider RG, Senior AW, Jumper J, Hassabis D, Kohli P, Avsec Ž. Cheng J, et al. Among authors: senior aw. Science. 2023 Sep 22;381(6664):eadg7492. doi: 10.1126/science.adg7492. Epub 2023 Sep 22. Science. 2023. PMID: 37733863 Free article.
Highly accurate protein structure prediction for the human proteome.
Tunyasuvunakool K, Adler J, Wu Z, Green T, Zielinski M, Žídek A, Bridgland A, Cowie A, Meyer C, Laydon A, Velankar S, Kleywegt GJ, Bateman A, Evans R, Pritzel A, Figurnov M, Ronneberger O, Bates R, Kohl SAA, Potapenko A, Ballard AJ, Romera-Paredes B, Nikolov S, Jain R, Clancy E, Reiman D, Petersen S, Senior AW, Kavukcuoglu K, Birney E, Kohli P, Jumper J, Hassabis D. Tunyasuvunakool K, et al. Among authors: senior aw. Nature. 2021 Aug;596(7873):590-596. doi: 10.1038/s41586-021-03828-1. Epub 2021 Jul 22. Nature. 2021. PMID: 34293799 Free PMC article.
Improved protein structure prediction using potentials from deep learning.
Senior AW, Evans R, Jumper J, Kirkpatrick J, Sifre L, Green T, Qin C, Žídek A, Nelson AWR, Bridgland A, Penedones H, Petersen S, Simonyan K, Crossan S, Kohli P, Jones DT, Silver D, Kavukcuoglu K, Hassabis D. Senior AW, et al. Nature. 2020 Jan;577(7792):706-710. doi: 10.1038/s41586-019-1923-7. Epub 2020 Jan 15. Nature. 2020. PMID: 31942072
Applying and improving AlphaFold at CASP14.
Jumper J, Evans R, Pritzel A, Green T, Figurnov M, Ronneberger O, Tunyasuvunakool K, Bates R, Žídek A, Potapenko A, Bridgland A, Meyer C, Kohl SAA, Ballard AJ, Cowie A, Romera-Paredes B, Nikolov S, Jain R, Adler J, Back T, Petersen S, Reiman D, Clancy E, Zielinski M, Steinegger M, Pacholska M, Berghammer T, Silver D, Vinyals O, Senior AW, Kavukcuoglu K, Kohli P, Hassabis D. Jumper J, et al. Among authors: senior aw. Proteins. 2021 Dec;89(12):1711-1721. doi: 10.1002/prot.26257. Proteins. 2021. PMID: 34599769 Free PMC article.
Learning high-accuracy error decoding for quantum processors.
Bausch J, Senior AW, Heras FJH, Edlich T, Davies A, Newman M, Jones C, Satzinger K, Niu MY, Blackwell S, Holland G, Kafri D, Atalaya J, Gidney C, Hassabis D, Boixo S, Neven H, Kohli P. Bausch J, et al. Among authors: senior aw. Nature. 2024 Nov;635(8040):834-840. doi: 10.1038/s41586-024-08148-8. Epub 2024 Nov 20. Nature. 2024. PMID: 39567694 Free PMC article.
Scaling and logic in the colour code on a superconducting quantum processor.
Lacroix N, Bourassa A, Heras FJH, Zhang LM, Bausch J, Senior AW, Edlich T, Shutty N, Sivak V, Bengtsson A, McEwen M, Higgott O, Kafri D, Claes J, Morvan A, Chen Z, Zalcman A, Madhuk S, Acharya R, Aghababaie Beni L, Aigeldinger G, Alcaraz R, Andersen TI, Ansmann M, Arute F, Arya K, Asfaw A, Atalaya J, Babbush R, Ballard B, Bardin JC, Bilmes A, Blackwell S, Bovaird J, Bowers D, Brill L, Broughton M, Browne DA, Buchea B, Buckley BB, Burger T, Burkett B, Bushnell N, Cabrera A, Campero J, Chang HS, Chiaro B, Chih LY, Cleland AY, Cogan J, Collins R, Conner P, Courtney W, Crook AL, Curtin B, Das S, Demura S, De Lorenzo L, Di Paolo A, Donohoe P, Drozdov I, Dunsworth A, Eickbusch A, Elbag AM, Elzouka M, Erickson C, Ferreira VS, Flores Burgos L, Forati E, Fowler AG, Foxen B, Ganjam S, Garcia G, Gasca R, Genois É, Giang W, Gilboa D, Gosula R, Grajales Dau A, Graumann D, Greene A, Gross JA, Ha T, Habegger S, Hansen M, Harrigan MP, Harrington SD, Heslin S, Heu P, Hiltermann R, Hilton J, Hong S, Huang HY, Huff A, Huggins WJ, Jeffrey E, Jiang Z, Jin X, Joshi C, Juhas P, Kabel A, Kang H, Karamlou AH, Kechedzhi K, Khaire T, Khattar T, Khezri M, Kim S, Klimov PV, Kobrin B, Korotkov AN, Kostr… See abstract for full author list ➔ Lacroix N, et al. Among authors: senior aw. Nature. 2025 Sep;645(8081):614-619. doi: 10.1038/s41586-025-09061-4. Epub 2025 May 26. Nature. 2025. PMID: 40418964 Free PMC article.
Protein structure prediction using multiple deep neural networks in the 13th Critical Assessment of Protein Structure Prediction (CASP13).
Senior AW, Evans R, Jumper J, Kirkpatrick J, Sifre L, Green T, Qin C, Žídek A, Nelson AWR, Bridgland A, Penedones H, Petersen S, Simonyan K, Crossan S, Kohli P, Jones DT, Silver D, Kavukcuoglu K, Hassabis D. Senior AW, et al. Proteins. 2019 Dec;87(12):1141-1148. doi: 10.1002/prot.25834. Proteins. 2019. PMID: 31602685 Free PMC article.